2yri: Difference between revisions

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OCA

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-[[Image:2yri.png|left|200px]]
+==Crystal structure of alanine-pyruvate aminotransferase with 2-methylserine==
+<StructureSection load='2yri' size='340' side='right' caption='[[2yri]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-{{STRUCTURE_2yri|  PDB=2yri  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2yri]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YRI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YRI FirstGlance]. <br>
-===Crystal structure of alanine-pyruvate aminotransferase with 2-methylserine===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MMM:(S,E)-3-HYDROXY-2-((3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL)METHYLENEAMINO)-2-METHYLPROPANOIC+ACID'>MMM</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene><br>
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yri FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yri OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yri RCSB], [http://www.ebi.ac.uk/pdbsum/2yri PDBsum], [http://www.topsan.org/Proteins/RSGI/2yri TOPSAN]</span></td></tr>
+<table>
-==About this Structure==
+== Evolutionary Conservation ==
-[[2yri]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YRI OCA].
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/2yri_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Thermus thermophilus]]
 [[Category: Goto, M.]]