2omk: Difference between revisions

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[[Image:2omk.png|left|200px]]
==Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase==
 
<StructureSection load='2omk' size='340' side='right' caption='[[2omk]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
{{STRUCTURE_2omk|  PDB=2omk  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2omk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OMK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OMK FirstGlance]. <br>
===Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase===
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SNN:L-3-AMINOSUCCINIMIDE'>SNN</scene></td></tr>
 
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT2397 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226186 Bacteroides thetaiotaomicron VPI-5482])</td></tr>
 
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thiamine_diphosphokinase Thiamine diphosphokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.6.2 2.7.6.2] </span></td></tr>
==About this Structure==
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2omk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2omk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2omk RCSB], [http://www.ebi.ac.uk/pdbsum/2omk PDBsum], [http://www.topsan.org/Proteins/MCSG/2omk TOPSAN]</span></td></tr>
[[2omk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OMK OCA].  
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/2omk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacteroides thetaiotaomicron vpi-5482]]
[[Category: Bacteroides thetaiotaomicron vpi-5482]]
[[Category: Thiamine diphosphokinase]]
[[Category: Thiamine diphosphokinase]]

Revision as of 23:06, 30 September 2014

Structure of the Bacteroides Thetaiotaomicron Thiamin PyrophosphokinaseStructure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase

Structural highlights

2omk is a 2 chain structure with sequence from Bacteroides thetaiotaomicron vpi-5482. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:,
Gene:BT2397 (Bacteroides thetaiotaomicron VPI-5482)
Activity:Thiamine diphosphokinase, with EC number 2.7.6.2
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2omk, resolution 1.80Å

Drag the structure with the mouse to rotate

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OCA
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