1v5n: Difference between revisions

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[[Image:1v5n.png|left|200px]]
==Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana==
 
<StructureSection load='1v5n' size='340' side='right' caption='[[1v5n]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
{{STRUCTURE_1v5n|  PDB=1v5n  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1v5n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V5N FirstGlance]. <br>
===Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana===
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
 
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA RAFL09-40-E23 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
 
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v5n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1v5n RCSB], [http://www.ebi.ac.uk/pdbsum/1v5n PDBsum], [http://www.topsan.org/Proteins/RSGI/1v5n TOPSAN]</span></td></tr>
==About this Structure==
<table>
[[1v5n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V5N OCA].  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v5/1v5n_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Inoue, M.]]
[[Category: Inoue, M.]]

Revision as of 00:28, 30 September 2014

Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thalianaSolution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

Structural highlights

1v5n is a 1 chain structure with sequence from Arabidopsis thaliana. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:RIKEN cDNA RAFL09-40-E23 (Arabidopsis thaliana)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Drag the structure with the mouse to rotate

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