1z3r: Difference between revisions

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[[Image:1z3r.png|left|200px]]
==Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III==
<StructureSection load='1z3r' size='340' side='right' caption='[[1z3r]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1z3r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Omsk_hemorrhagic_fever_virus Omsk hemorrhagic fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z3R FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z3r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z3r RCSB], [http://www.ebi.ac.uk/pdbsum/1z3r PDBsum]</span></td></tr>
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/1z3r_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
We have solved the NMR solution structure of domain III from the Omsk hemorrhagic fever virus envelope protein and report the first sequencing of the Guriev strain of this virus. Important structural differences between tick-borne flaviviruses, such as OHFV and TBE, and mosquito-borne flaviviruses, such as West Nile virus, are discussed.


{{STRUCTURE_1z3r|  PDB=1z3r  |  SCENE=  }}
Structure of the envelope protein domain III of Omsk hemorrhagic fever virus.,Volk DE, Chavez L, Beasley DW, Barrett AD, Holbrook MR, Gorenstein DG Virology. 2006 Jul 20;351(1):188-95. Epub 2006 May 2. PMID:16647096<ref>PMID:16647096</ref>


===Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_16647096}}
== References ==
 
<references/>
==About this Structure==
__TOC__
[[1z3r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Omsk_hemorrhagic_fever_virus Omsk hemorrhagic fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3R OCA].
</StructureSection>
 
==Reference==
<ref group="xtra">PMID:016647096</ref><references group="xtra"/>
[[Category: Omsk hemorrhagic fever virus]]
[[Category: Omsk hemorrhagic fever virus]]
[[Category: Barrett, A D.]]
[[Category: Barrett, A D.]]

Revision as of 00:00, 30 September 2014

Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain IIISolution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III

Structural highlights

1z3r is a 1 chain structure with sequence from Omsk hemorrhagic fever virus. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

We have solved the NMR solution structure of domain III from the Omsk hemorrhagic fever virus envelope protein and report the first sequencing of the Guriev strain of this virus. Important structural differences between tick-borne flaviviruses, such as OHFV and TBE, and mosquito-borne flaviviruses, such as West Nile virus, are discussed.

Structure of the envelope protein domain III of Omsk hemorrhagic fever virus.,Volk DE, Chavez L, Beasley DW, Barrett AD, Holbrook MR, Gorenstein DG Virology. 2006 Jul 20;351(1):188-95. Epub 2006 May 2. PMID:16647096[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Volk DE, Chavez L, Beasley DW, Barrett AD, Holbrook MR, Gorenstein DG. Structure of the envelope protein domain III of Omsk hemorrhagic fever virus. Virology. 2006 Jul 20;351(1):188-95. Epub 2006 May 2. PMID:16647096 doi:10.1016/j.virol.2006.03.030
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