3f6t: Difference between revisions

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-[[Image:3f6t.png|left|200px]]
+==Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution==
+<StructureSection load='3f6t' size='340' side='right' caption='[[3f6t]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-{{STRUCTURE_3f6t|  PDB=3f6t  |  SCENE=  }}
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3f6t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus_ncfm Lactobacillus acidophilus ncfm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F6T FirstGlance]. <br>
-===Crystal structure of aspartate aminotransferase (E.C. 2.6.1.1) (YP_194538.1) from Lactobacillus acidophilus NCFM at 2.15 A resolution===
+</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene><br>
+<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLP:2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE)'>LLP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LBA1695, YP_194538.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272621 Lactobacillus acidophilus NCFM])</td></tr>
-==About this Structure==
+<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aspartate_transaminase Aspartate transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.1 2.6.1.1] </span></td></tr>
-[[3f6t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_acidophilus_ncfm Lactobacillus acidophilus ncfm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F6T OCA].
+<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f6t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f6t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f6t RCSB], [http://www.ebi.ac.uk/pdbsum/3f6t PDBsum], [http://www.topsan.org/Proteins/JCSG/3f6t TOPSAN]</span></td></tr>
+<table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f6/3f6t_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Aspartate Aminotransferase|Aspartate Aminotransferase]]
+__TOC__
+</StructureSection>
 [[Category: Aspartate transaminase]]
 [[Category: Lactobacillus acidophilus ncfm]]