3gm8: Difference between revisions

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[[Image:3gm8.png|left|200px]]
==Crystal structure of a beta-glycosidase from Bacteroides vulgatus==
 
<StructureSection load='3gm8' size='340' side='right' caption='[[3gm8]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
{{STRUCTURE_3gm8|  PDB=3gm8  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3gm8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_vulgatus Bacteroides vulgatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM8 FirstGlance]. <br>
===Crystal structure of a beta-glycosidase from Bacteroides vulgatus===
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
 
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BVU_0391 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=821 Bacteroides vulgatus])</td></tr>
 
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm8 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm8 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gm8 TOPSAN]</span></td></tr>
==About this Structure==
<table>
[[3gm8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_vulgatus Bacteroides vulgatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM8 OCA].  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacteroides vulgatus]]
[[Category: Bacteroides vulgatus]]
[[Category: Almo, S C.]]
[[Category: Almo, S C.]]

Revision as of 16:06, 29 September 2014

Crystal structure of a beta-glycosidase from Bacteroides vulgatusCrystal structure of a beta-glycosidase from Bacteroides vulgatus

Structural highlights

3gm8 is a 1 chain structure with sequence from Bacteroides vulgatus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Gene:BVU_0391 (Bacteroides vulgatus)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3gm8, resolution 2.40Å

Drag the structure with the mouse to rotate

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OCA
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