3dec: Difference between revisions

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[[Image:3dec.png|left|200px]]
==Crystal structure of a glycosyl hydrolases family 2 protein from Bacteroides thetaiotaomicron==
 
<StructureSection load='3dec' size='340' side='right' caption='[[3dec]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
{{STRUCTURE_3dec|  PDB=3dec  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dec]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DEC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DEC FirstGlance]. <br>
===Crystal structure of a glycosyl hydrolases family 2 protein from Bacteroides thetaiotaomicron===
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene><br>
 
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bga|3bga]]</td></tr>
==About this Structure==
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BT_3179 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226186 Bacteroides thetaiotaomicron VPI-5482])</td></tr>
[[3dec]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_vpi-5482 Bacteroides thetaiotaomicron vpi-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DEC OCA].  
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dec FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dec OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dec RCSB], [http://www.ebi.ac.uk/pdbsum/3dec PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dec TOPSAN]</span></td></tr>
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3dec_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Galactosidase|Galactosidase]]
*[[Galactosidase|Galactosidase]]
__TOC__
</StructureSection>
[[Category: Bacteroides thetaiotaomicron vpi-5482]]
[[Category: Bacteroides thetaiotaomicron vpi-5482]]
[[Category: Bonanno, J.]]
[[Category: Bonanno, J.]]

Revision as of 16:06, 29 September 2014

Crystal structure of a glycosyl hydrolases family 2 protein from Bacteroides thetaiotaomicronCrystal structure of a glycosyl hydrolases family 2 protein from Bacteroides thetaiotaomicron

Structural highlights

3dec is a 1 chain structure with sequence from Bacteroides thetaiotaomicron vpi-5482. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Related:3bga
Gene:BT_3179 (Bacteroides thetaiotaomicron VPI-5482)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3dec, resolution 2.80Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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