1vd1: Difference between revisions

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[[Image:1vd1.png|left|200px]]
==Crystal structure of RNase NT in complex with 5'-AMP==
 
<StructureSection load='1vd1' size='340' side='right' caption='[[1vd1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
{{STRUCTURE_1vd1|  PDB=1vd1  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1vd1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_glutinosa Nicotiana glutinosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VD1 FirstGlance]. <br>
===Crystal structure of RNase NT in complex with 5'-AMP===
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene><br>
 
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vcz|1vcz]], [[1vd3|1vd3]]</td></tr>
 
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_T(2) Ribonuclease T(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.1 3.1.27.1] </span></td></tr>
==About this Structure==
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vd1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vd1 RCSB], [http://www.ebi.ac.uk/pdbsum/1vd1 PDBsum]</span></td></tr>
[[1vd1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_glutinosa Nicotiana glutinosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VD1 OCA].  
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vd1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ribonuclease|Ribonuclease]]
*[[Ribonuclease|Ribonuclease]]
__TOC__
</StructureSection>
[[Category: Nicotiana glutinosa]]
[[Category: Nicotiana glutinosa]]
[[Category: Kakuta, Y.]]
[[Category: Kakuta, Y.]]

Revision as of 01:59, 29 September 2014

Crystal structure of RNase NT in complex with 5'-AMPCrystal structure of RNase NT in complex with 5'-AMP

Structural highlights

1vd1 is a 1 chain structure with sequence from Nicotiana glutinosa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Related:1vcz, 1vd3
Activity:Ribonuclease T(2), with EC number 3.1.27.1
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1vd1, resolution 1.80Å

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