1m5g: Difference between revisions

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{{Theoretical_model}}
==ALL-ATOM HOMOLOGY STRUCTURE OF THE ESCHERICHIA COLI 30S RIBOSOMAL SUBUNIT==
<StructureSection load='1m5g' size='340' side='right' caption='[[1m5g]]' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M5G FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m5g FirstGlance], [http://www.ebi.ac.uk/pdbsum/1m5g PDBsum]</span></td></tr>
<table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Understanding the structural basis of ribosomal function requires close comparison between biochemical and structural data. Although a large amount of biochemical data are available for the Escherichia coli ribosome, the structure has not been solved to atomic resolution. Using a new RNA homology procedure, we have modeled the all-atom structure of the E. coli 30S ribosomal subunit. We find that the tertiary structure of the ribosome core, including the A-, P- and E-sites, is highly conserved. The hypervariable regions in our structure, which differ from the structure of the 30S ribosomal subunit from Thermus thermophilus, are consistent with the cryo-EM map of the E. coli ribosome.


[[Image:1m5g.png|left|200px]]
All-atom homology model of the Escherichia coli 30S ribosomal subunit.,Tung CS, Joseph S, Sanbonmatsu KY Nat Struct Biol. 2002 Oct;9(10):750-5. PMID:12244297<ref>PMID:12244297</ref>


{{STRUCTURE_1m5g|  PDB=1m5g  |  SCENE=  }}
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
===ALL-ATOM HOMOLOGY STRUCTURE OF THE ESCHERICHIA COLI 30S RIBOSOMAL SUBUNIT===
== References ==
 
<references/>
{{ABSTRACT_PUBMED_12244297}}
__TOC__
 
</StructureSection>
==Reference==
<ref group="xtra">PMID:012244297</ref><references group="xtra"/>
[[Category: Joseph, S]]
[[Category: Joseph, S]]
[[Category: Sanbonmatsu, K]]
[[Category: Sanbonmatsu, K]]
[[Category: Tung, C]]
[[Category: Tung, C]]

Revision as of 18:14, 28 September 2014

ALL-ATOM HOMOLOGY STRUCTURE OF THE ESCHERICHIA COLI 30S RIBOSOMAL SUBUNITALL-ATOM HOMOLOGY STRUCTURE OF THE ESCHERICHIA COLI 30S RIBOSOMAL SUBUNIT

Structural highlights

For a guided tour on the structure components use FirstGlance.
Resources:FirstGlance, PDBsum

Publication Abstract from PubMed

Understanding the structural basis of ribosomal function requires close comparison between biochemical and structural data. Although a large amount of biochemical data are available for the Escherichia coli ribosome, the structure has not been solved to atomic resolution. Using a new RNA homology procedure, we have modeled the all-atom structure of the E. coli 30S ribosomal subunit. We find that the tertiary structure of the ribosome core, including the A-, P- and E-sites, is highly conserved. The hypervariable regions in our structure, which differ from the structure of the 30S ribosomal subunit from Thermus thermophilus, are consistent with the cryo-EM map of the E. coli ribosome.

All-atom homology model of the Escherichia coli 30S ribosomal subunit.,Tung CS, Joseph S, Sanbonmatsu KY Nat Struct Biol. 2002 Oct;9(10):750-5. PMID:12244297[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Tung CS, Joseph S, Sanbonmatsu KY. All-atom homology model of the Escherichia coli 30S ribosomal subunit. Nat Struct Biol. 2002 Oct;9(10):750-5. PMID:12244297 doi:10.1038/nsb841
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