1i6a: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
m Protected "1i6a" [edit=sysop:move=sysop]
No edit summary
Line 1: Line 1:
[[Image:1i6a.png|left|200px]]
==CRYSTAL STUCTURE OF THE OXIDIZED FORM OF OXYR==
<StructureSection load='1i6a' size='340' side='right' caption='[[1i6a]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1i6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1I6A FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1i69|1i69]]</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i6a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1i6a RCSB], [http://www.ebi.ac.uk/pdbsum/1i6a PDBsum]</span></td></tr>
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i6/1i6a_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The Escherichia coli OxyR transcription factor senses H2O2 and is activated through the formation of an intramolecular disulfide bond. Here we present the crystal structures of the regulatory domain of OxyR in its reduced and oxidized forms, determined at 2.7 A and 2.3 A resolutions, respectively. In the reduced form, the two redox-active cysteines are separated by approximately 17 A. Disulfide bond formation in the oxidized form results in a significant structural change in the regulatory domain. The structural remodeling, which leads to different oligomeric associations, accounts for the redox-dependent switch in OxyR and provides a novel example of protein regulation by "fold editing" through a reversible disulfide bond formation within a folded domain.


{{STRUCTURE_1i6a|  PDB=1i6a  |  SCENE=  }}
Structural basis of the redox switch in the OxyR transcription factor.,Choi H, Kim S, Mukhopadhyay P, Cho S, Woo J, Storz G, Ryu S Cell. 2001 Apr 6;105(1):103-13. PMID:11301006<ref>PMID:11301006</ref>


===CRYSTAL STUCTURE OF THE OXIDIZED FORM OF OXYR===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_11301006}}
== References ==
 
<references/>
==About this Structure==
__TOC__
[[1i6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1I6A OCA].
</StructureSection>
 
==Reference==
<ref group="xtra">PMID:011301006</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Choi, H.]]
[[Category: Choi, H.]]

Revision as of 14:07, 28 September 2014

CRYSTAL STUCTURE OF THE OXIDIZED FORM OF OXYRCRYSTAL STUCTURE OF THE OXIDIZED FORM OF OXYR

Structural highlights

1i6a is a 1 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:1i69
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The Escherichia coli OxyR transcription factor senses H2O2 and is activated through the formation of an intramolecular disulfide bond. Here we present the crystal structures of the regulatory domain of OxyR in its reduced and oxidized forms, determined at 2.7 A and 2.3 A resolutions, respectively. In the reduced form, the two redox-active cysteines are separated by approximately 17 A. Disulfide bond formation in the oxidized form results in a significant structural change in the regulatory domain. The structural remodeling, which leads to different oligomeric associations, accounts for the redox-dependent switch in OxyR and provides a novel example of protein regulation by "fold editing" through a reversible disulfide bond formation within a folded domain.

Structural basis of the redox switch in the OxyR transcription factor.,Choi H, Kim S, Mukhopadhyay P, Cho S, Woo J, Storz G, Ryu S Cell. 2001 Apr 6;105(1):103-13. PMID:11301006[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Choi H, Kim S, Mukhopadhyay P, Cho S, Woo J, Storz G, Ryu S. Structural basis of the redox switch in the OxyR transcription factor. Cell. 2001 Apr 6;105(1):103-13. PMID:11301006

1i6a, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA