1gbs: Difference between revisions

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[[Image:1gbs.png|left|200px]]
==CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTION==
<StructureSection load='1gbs' size='340' side='right' caption='[[1gbs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1gbs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cygnus_atratus Cygnus atratus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GBS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GBS FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gbs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gbs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gbs RCSB], [http://www.ebi.ac.uk/pdbsum/1gbs PDBsum]</span></td></tr>
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/1gbs_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The crystal structure of a goose-type lysozyme from the egg white of black swan has been determined at 1.9 A resolution using a semi-automatic procedure based on the Calpha coordinates of the homologous goose protein.


{{STRUCTURE_1gbs|  PDB=1gbs  |  SCENE=  }}
A strategy for rapid and effective refinement applied to black swan lysozyme.,Rao Z, Esnouf R, Isaacs N, Stuart D Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):331-6. PMID:15299299<ref>PMID:15299299</ref>


===CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTION===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_15299299}}
 
==About this Structure==
[[1gbs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cygnus_atratus Cygnus atratus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GBS OCA].


==See Also==
==See Also==
*[[Hen Egg-White (HEW) Lysozyme|Hen Egg-White (HEW) Lysozyme]]
*[[Lysozyme 3D structures|Lysozyme 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:015299299</ref><ref group="xtra">PMID:011170211</ref><references group="xtra"/>
__TOC__
</StructureSection>
[[Category: Cygnus atratus]]
[[Category: Cygnus atratus]]
[[Category: Lysozyme]]
[[Category: Lysozyme]]

Revision as of 11:49, 28 September 2014

CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTIONCRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTION

Structural highlights

1gbs is a 1 chain structure with sequence from Cygnus atratus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Activity:Lysozyme, with EC number 3.2.1.17
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The crystal structure of a goose-type lysozyme from the egg white of black swan has been determined at 1.9 A resolution using a semi-automatic procedure based on the Calpha coordinates of the homologous goose protein.

A strategy for rapid and effective refinement applied to black swan lysozyme.,Rao Z, Esnouf R, Isaacs N, Stuart D Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):331-6. PMID:15299299[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Rao Z, Esnouf R, Isaacs N, Stuart D. A strategy for rapid and effective refinement applied to black swan lysozyme. Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):331-6. PMID:15299299 doi:10.1107/S0907444994009893

1gbs, resolution 1.50Å

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