2mlg: Difference between revisions
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==Stf76 from the Sulfolobus islandicus plasmid-virus pSSVx== | |||
=== | <StructureSection load='2mlg' size='340' side='right' caption='[[2mlg]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | ||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2mlg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fuselloviridae Fuselloviridae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MLG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2MLG FirstGlance]. <br> | |||
</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2mlg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mlg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2mlg RCSB], [http://www.ebi.ac.uk/pdbsum/2mlg PDBsum]</span></td></tr> | |||
<table> | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
The hybrid plasmid-virus pSSVx from Sulfolobus islandicus presents an open reading frame encoding a 76 amino acid protein, namely Stf76, that does not show significant sequence homology with any protein with known 3D structure. The recombinant protein recognizes specifically two DNA-binding sites located in its own promoter, thus suggesting an auto-regulated role of its expression. Circular dichroism, spectrofluorimetric, light scattering and isothermal titration calorimetry experiments indicated a 2:1 molar ratio (protein:DNA) upon binding to the DNA target containing a single site. Furthermore, the solution structure of Stf76, determined by nuclear magnetic resonance (NMR) using chemical shift Rosetta software, has shown that the protein assumes a winged helix-turn-helix fold. NMR chemical shift perturbation analysis has been performed for the identification of the residues responsible for DNA interaction. In addition, a model of the Stf76-DNA complex has been built using as template a structurally related homolog. | |||
Structural and functional studies of Stf76 from the Sulfolobus islandicus plasmid-virus pSSVx: a novel peculiar member of the winged helix-turn-helix transcription factor family.,Contursi P, Farina B, Pirone L, Fusco S, Russo L, Bartolucci S, Fattorusso R, Pedone E Nucleic Acids Res. 2014 May 1;42(9):5993-6011. doi: 10.1093/nar/gku215. Epub 2014, Mar 25. PMID:24682827<ref>PMID:24682827</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Fuselloviridae]] | |||
[[Category: Farina, B.]] | [[Category: Farina, B.]] | ||
[[Category: Fattorusso, R.]] | [[Category: Fattorusso, R.]] | ||
Revision as of 07:38, 4 June 2014
Stf76 from the Sulfolobus islandicus plasmid-virus pSSVxStf76 from the Sulfolobus islandicus plasmid-virus pSSVx
Structural highlights
Publication Abstract from PubMedThe hybrid plasmid-virus pSSVx from Sulfolobus islandicus presents an open reading frame encoding a 76 amino acid protein, namely Stf76, that does not show significant sequence homology with any protein with known 3D structure. The recombinant protein recognizes specifically two DNA-binding sites located in its own promoter, thus suggesting an auto-regulated role of its expression. Circular dichroism, spectrofluorimetric, light scattering and isothermal titration calorimetry experiments indicated a 2:1 molar ratio (protein:DNA) upon binding to the DNA target containing a single site. Furthermore, the solution structure of Stf76, determined by nuclear magnetic resonance (NMR) using chemical shift Rosetta software, has shown that the protein assumes a winged helix-turn-helix fold. NMR chemical shift perturbation analysis has been performed for the identification of the residues responsible for DNA interaction. In addition, a model of the Stf76-DNA complex has been built using as template a structurally related homolog. Structural and functional studies of Stf76 from the Sulfolobus islandicus plasmid-virus pSSVx: a novel peculiar member of the winged helix-turn-helix transcription factor family.,Contursi P, Farina B, Pirone L, Fusco S, Russo L, Bartolucci S, Fattorusso R, Pedone E Nucleic Acids Res. 2014 May 1;42(9):5993-6011. doi: 10.1093/nar/gku215. Epub 2014, Mar 25. PMID:24682827[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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