3kux: Difference between revisions

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[[Image:3kux.png|left|200px]]
==Structure of the YPO2259 putative oxidoreductase from Yersinia pestis==
 
<StructureSection load='3kux' size='340' side='right' caption='[[3kux]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
<!--
== Structural highlights ==
The line below this paragraph, containing "STRUCTURE_3kux", creates the "Structure Box" on the page.
<table><tr><td colspan='2'>[[3kux]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KUX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KUX FirstGlance]. <br>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene><br>
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
or leave the SCENE parameter empty for the default display.
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mviM4, y2101, YPO2259, YP_2055 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 Yersinia pestis])</td></tr>
-->
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kux FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kux OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kux RCSB], [http://www.ebi.ac.uk/pdbsum/3kux PDBsum]</span></td></tr>
{{STRUCTURE_3kux|  PDB=3kux  |  SCENE=  }}
<table>
 
== Evolutionary Conservation ==
===Structure of the YPO2259 putative oxidoreductase from Yersinia pestis===
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ku/3kux_consurf.spt"</scriptWhenChecked>
[[3kux]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KUX OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Yersinia pestis]]
[[Category: Yersinia pestis]]
[[Category: Anderson, S M.]]
[[Category: Anderson, S M.]]

Revision as of 12:39, 21 May 2014

Structure of the YPO2259 putative oxidoreductase from Yersinia pestisStructure of the YPO2259 putative oxidoreductase from Yersinia pestis

Structural highlights

3kux is a 1 chain structure with sequence from Yersinia pestis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:mviM4, y2101, YPO2259, YP_2055 (Yersinia pestis)
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3kux, resolution 2.75Å

Drag the structure with the mouse to rotate

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