7upj: Difference between revisions
New page: left|200px<br /> <applet load="7upj" size="450" color="white" frame="true" align="right" spinBox="true" caption="7upj, resolution 2.0Å" /> '''HIV-1 PROTEASE/U1019... |
No edit summary |
||
Line 1: | Line 1: | ||
[[Image:7upj.gif|left|200px]]<br /> | [[Image:7upj.gif|left|200px]]<br /><applet load="7upj" size="350" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="7upj" size=" | |||
caption="7upj, resolution 2.0Å" /> | caption="7upj, resolution 2.0Å" /> | ||
'''HIV-1 PROTEASE/U101935 COMPLEX'''<br /> | '''HIV-1 PROTEASE/U101935 COMPLEX'''<br /> | ||
==Overview== | ==Overview== | ||
Recently, cyclooctylpyranone derivatives with m-carboxamide substituents | Recently, cyclooctylpyranone derivatives with m-carboxamide substituents (e.g. 2c) were identified as potent, nonpeptidic HIV protease inhibitors, but these compounds lacked significant antiviral activity in cell culture. Substitution of a sulfonamide group at the meta position, however, produces compounds with excellent HIV protease binding affinity and antiviral activity. Guided by an iterative structure-based drug design process, we have prepared and evaluated a number of these derivatives, which are readily available via a seven-step synthesis. A few of the most potent compounds were further evaluated for such characteristics as pharmacokinetics and toxicity in rats and dogs. From this work, the p-cyanophenyl sulfonamide derivative 35k emerged as a promising inhibitor, was selected for further development, and entered phase I clinical trials. | ||
==About this Structure== | ==About this Structure== | ||
7UPJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1] with INU as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] Full crystallographic information is available from [http:// | 7UPJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1] with <scene name='pdbligand=INU:'>INU</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7UPJ OCA]. | ||
==Reference== | ==Reference== | ||
Line 15: | Line 14: | ||
[[Category: Human immunodeficiency virus 1]] | [[Category: Human immunodeficiency virus 1]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Janakiraman, M | [[Category: Janakiraman, M N.]] | ||
[[Category: Watenpaugh, K | [[Category: Watenpaugh, K D.]] | ||
[[Category: INU]] | [[Category: INU]] | ||
[[Category: acid protease]] | [[Category: acid protease]] | ||
Line 22: | Line 21: | ||
[[Category: hydrolase]] | [[Category: hydrolase]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:17:45 2008'' |