6cts: Difference between revisions

New page: left|200px<br /><applet load="6cts" size="450" color="white" frame="true" align="right" spinBox="true" caption="6cts, resolution 2.5Å" /> '''PROPOSED MECHANISM FO...
 
No edit summary
Line 1: Line 1:
[[Image:6cts.gif|left|200px]]<br /><applet load="6cts" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:6cts.gif|left|200px]]<br /><applet load="6cts" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="6cts, resolution 2.5&Aring;" />
caption="6cts, resolution 2.5&Aring;" />
'''PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE SYNTHASE. 1.9-ANGSTROMS STRUCTURE OF THE TERNARY COMPLEX WITH OXALOACETATE AND CARBOXYMETHYL COENZYME A'''<br />
'''PROPOSED MECHANISM FOR THE CONDENSATION REACTION OF CITRATE SYNTHASE. 1.9-ANGSTROMS STRUCTURE OF THE TERNARY COMPLEX WITH OXALOACETATE AND CARBOXYMETHYL COENZYME A'''<br />


==Overview==
==Overview==
The crystal structure of the ternary complex citrate, synthase-oxaloacetate-carboxymethyl coenzyme A has been solved to a, resolution of 1.9 A and refined to a conventional crystallographic R, factor of 0.185. The structure resembles a proposed transition state of, the condensation reaction and suggests that the condensation reaction, proceeds through a neutral enol rather than an enolate intermediate. A, mechanism for the condensation reaction is proposed which involves the, participation of three key catalytic groups (Asp 375, His 274, and His, 320) in two distinct steps. The proposed mechanism invokes concerted, general acid-base catalysis twice to explain both the energetics of the, reaction and the experimentally observed inversion of stereochemistry at, the attacking carbon atom.
The crystal structure of the ternary complex citrate synthase-oxaloacetate-carboxymethyl coenzyme A has been solved to a resolution of 1.9 A and refined to a conventional crystallographic R factor of 0.185. The structure resembles a proposed transition state of the condensation reaction and suggests that the condensation reaction proceeds through a neutral enol rather than an enolate intermediate. A mechanism for the condensation reaction is proposed which involves the participation of three key catalytic groups (Asp 375, His 274, and His 320) in two distinct steps. The proposed mechanism invokes concerted general acid-base catalysis twice to explain both the energetics of the reaction and the experimentally observed inversion of stereochemistry at the attacking carbon atom.


==About this Structure==
==About this Structure==
6CTS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] with CIC as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Citrate_(Si)-synthase Citrate (Si)-synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.3.1 2.3.3.1] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=6CTS OCA].  
6CTS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] with <scene name='pdbligand=CIC:'>CIC</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Citrate_(Si)-synthase Citrate (Si)-synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.3.1 2.3.3.1] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CTS OCA].  


==Reference==
==Reference==
Line 16: Line 16:
[[Category: Branchaud, B.]]
[[Category: Branchaud, B.]]
[[Category: Karpusas, M.]]
[[Category: Karpusas, M.]]
[[Category: Remington, S.J.]]
[[Category: Remington, S J.]]
[[Category: CIC]]
[[Category: CIC]]
[[Category: oxo-acid-lyase]]
[[Category: oxo-acid-lyase]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 15:31:29 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:16:12 2008''

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA