ATPase: Difference between revisions
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[[ATPase]] is an enzyme which catalyzes the breakdown of ATP into ADP and a phosphate ion. This dephosphorylation releases energy which the enzyme uses to drive other reactions. Vacuolar-type H+ ATPase (V-ATPase) couples the energy to proton transport across membranes. | [[ATPase]] is an enzyme which catalyzes the breakdown of ATP into ADP and a phosphate ion. This dephosphorylation releases energy which the enzyme uses to drive other reactions. Vacuolar-type H+ ATPase (V-ATPase) couples the energy to proton transport across membranes. ATPAse types include: '''F-ATPase''' - the prime producers of ATP; '''V-ATPase''' transport solutes; '''A-ATPase''' are found in archaea; '''P-ATPase''' transport ions; '''E-ATPase''' hydrolyze extracellular ATP. Vacuolar-type H+ ATPase couples the energy to proton transport across membranes. MipZ is an ATPase which forms a complex with the chromosome partitioning protein ParB and is responsible for the regulation of FtsZ ring formation. ATPase domains include metal-binding domain (MBD) and nucleotide-binding domain (NBD). For more details see:<br /> | ||
* | *Cu transporting ATPase are in [[P(1B)-Type Cu(I) Transporting ATPases ATP7A and ATP7B]].<br /> | ||
* | *Na/K transporting ATPase are in [[Sodium-Potassium ATPase]].<br /> | ||
* | *Transitional endoplasmic reticulum ATPase are in [[Valosin Containing Protein D120]].<br /> | ||
*[[A-ATP Synthase]]. | |||
'''Structural and functional insights into a dodecameric molecular machine – The RuvBL1/RuvBL2 complex (ATPase)<ref >PMID: 21933716</ref>'''<br /> | '''Structural and functional insights into a dodecameric molecular machine – The RuvBL1/RuvBL2 complex (ATPase)<ref >PMID: 21933716</ref>'''<br /> | ||
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
=== | ===F-ATPase=== | ||
''F1F0 ATPase α subunit'' | |||
[[2jmx]] - bF1-ATPS+subunit O<br /> | |||
[[2r9v]] - F1-ATPS – ''Thermotoga maritima'' | |||
''F1F0 ATPase β subunit'' | |||
[[1b9u]] – EcF1-ATPS membrane domain – ''Escherichia coli'' -NMR<BR /> | |||
[[1l2p]] – EcF1-ATPS dimerization domain<br /> | |||
[[2khk]] - EcF1-ATPS fragment – NMR<BR /> | |||
''F1F0 ATPase γ subunit'' | |||
[[1wu0]] – BsATPS – NMR<BR /> | |||
[[1a91]], [[1c0v]], [[1aty]], [[1c99]] - EcF1-ATPS – NMR<BR /> | |||
[[2wgm]], [[1yce]] – F0-ATPS – ''Ilyobacter tartaricus''<br /> | |||
[[2x2v]] – F0-ATPS – ''Bacillus pseudofirmus''<br /> | |||
''F1F0 ATPase δ subunit'' | |||
[[1abv]] – EcF1-ATPS N terminal – NMR<BR /> | |||
''F1F0 ATPase ε subunit'' | |||
[[2rq6]], [[2rq7]] - F1-ATPS – ''Thermosynechococcus elongatus''<br /> | |||
[[1abv]]– EcF1-ATPS (mutant)<br /> | |||
[[1bsh]], [[1bsn]] – EcF1-ATPS – NMR<BR /> | |||
[[2e5t]], [[2e5u]] – BsF1-ATPS C terminal – NMR<BR /> | |||
[[2e5y]] – BsF1-ATPS | |||
''F1F0 ATPase α, β subunits'' | |||
[[1sky]] – BsF1-ATPS – Bacillus sp. Ps3 | |||
''F1F0 ATPase α, δ subunits'' | |||
[[2a7u]] – EcF1-ATPS N termini – NMR<BR /> | |||
''F1F0 ATPase β, δ subunits'' | |||
[[2cly]] – bF1-ATPS + ATPS coupling factor | |||
''F1F0 ATPase γ, ε subunits'' | |||
[[1fs0]] – EcF1-ATPS | |||
''F1F0 ATPase α, β, γ subunits'' | |||
[[1ohh]] – bF1-ATPS+ IF1 inhibitor – bovine<br /> | |||
[[1e1q]], [[2w6e]], [[2w6f]], [[2w6g]], [[2w6h]], [[2w6i]], [[2w6j]] - bF1-ATPS<br /> | |||
[[1e1r]] - bF1-ATPS+Mg+ADP+AlF4<br /> | |||
[[1w0j]], [[1w0k]] - bF1-ATPS+BeF3<br /> | |||
[[1nbm]] - bF1-ATPS+nitrobenzofurazan<br /> | |||
[[1mab]] - F1-ATPS – rat | |||
''F1F0 ATPase α, β, γ, δ, ε subunits'' | |||
[[4asu]] - bF1-ATPS<br /> | |||
[[2v7q]] - bF1-ATPS+inhibitor<br /> | |||
[[2xnd]], [[2xok]] - bF1-ATPS+ATPS lipid-binding protein<br /> | |||
[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP<br /> | |||
[[3oe7]], [[3oee]], [[3oeh]], [[3ofn]] - yF1-ATPS (mutant)<br /> | |||
[[3fks]], [[3zry]] - yF1-ATPS<br /> | |||
[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br /> | |||
''F1F0 ATPase α, β, γ, ε subunits'' | |||
[[3oaa]] – EcF1-ATPS (mutant)<br /> | |||
[[1e79]] - bFF1-ATPS<br /> | |||
''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits'' | |||
[[4b2q]] – yATPase subunits α,β,γ,δ,ε +9,B,D,6,O – Cryo EM | |||
[[1bmf]] - bF1-ATPS<br /> | |||
[[3dze]] – bF1-ATPS subunit S<br /> | |||
[[1cow]] - bF1-ATPS+aurovertin B | |||
===V-ATPase=== | |||
''V-ATPase subunit A'' | |||
[[3i4l]] - PhATPS subunit A+AMPPNP<br /> | |||
[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]] - PhATPS subunit A | |||
mutant)<br /> | |||
[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant)<br /> | |||
''V-ATPase subunit B'' | |||
[[2c61]] - MmATPS subunit B – ''Methanosarcina mazei''<br /> | |||
[[2rkw]], [[3b2q]], [[3ssa]], [[3tgw]], [[3tiv]] - MmATPS subunit B (mutant)<br /> | |||
[[3dsr]] - MmATPS subunit B+ADP<br /> | |||
[[3eiu]] - MmATPS subunit B+ATP<br /> | |||
''V-ATPase subunit C'' | |||
[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br /> | |||
[[3v3c]] - ATPS subunit C - pea<br /> | |||
[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) – ''Escherichia coli'' - NMR<br /> | |||
[[1r5z]], [[1v9m]] - TtATPS subunit C – ''Thermus thermophilus''<br /> | |||
[[3lg8]] - MtATPS subunit C C-terminal<br /> | |||
[[2w5j]] - ATPS subunit C - spinach<br /> | |||
''V-ATPase subunit E'' | |||
[[2kz9]] – yATPase subunit E<br /> | |||
[[2dm9]], [[2dma]], [[4dt0]] - PhATPS subunit E – ''Pyrococcus horikoshii''<br /> | |||
[[2kk7]] - MjATPS subunit E – ''Methanocaldococcus jannaschii''<br /> | |||
[[3v6i]] – TtATPS subunit E + VAPC<br /> | |||
''V-ATPase subunit F'' | |||
[[2qai]] - ATPS subunit F – ''Pyrococcus furiosus''<br /> | |||
[[2i4r]] - ATPS subunit F – ''Archaeoglobus fulgidus''<br /> | |||
[[2ov6]] - MmATPS subunit F - NMR<br /> | |||
[[2d00]] - TtATPS subunit F <br /> | |||
[[4ix9]] – yATP subunit F (mutant)<br /> | |||
''V-ATPase subunit G'' | |||
[[2k88]] - yATPS subunit G - NMR<br /> | |||
''V-ATPase subunit H'' | |||
[[1ho8]] – yATPS subunit H – yeast<br /> | |||
''V-ATPase subunit K'' | |||
[[2bl2]], [[2cyd]] - ATPS subunit K – ''Enterococcus hirae''<br /> | |||
''V-ATPase subunit I'' | |||
[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber'' | |||
[[4dl0]], [[4efa]] - yATPase subunits C,G,E<br /> | |||
[[3w3a]] - yATPS subunit A,B,D,F<br /> | |||
[[3a5c]], [[3a5d]] - TtATPS subunit A,B,D,F<br /> | |||
[[3gqb]] - TtATPS subunit A (mutant),B (mutant)<br /> | |||
[[3k5b]] - TtATPS subunit E (mutant)+C<br /> | |||
===P-ATPase=== | |||
''Cu transporting ATPase'' | |||
[[2kmv]], [[2kmx]], [[2arf]] – hATPase NBD – human – NMR<br /> | [[2kmv]], [[2kmx]], [[2arf]] – hATPase NBD – human – NMR<br /> | ||
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[[3rfu]] – ATPase – ''Legionella pneumophila''<br /> | [[3rfu]] – ATPase – ''Legionella pneumophila''<br /> | ||
[[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br /> | [[4f2f]] - ATPase metal-binding domain – ''Streptococcus pneumonia''<br /> | ||
[[3j08]], [[3j09]] - AfATPase<br /> | |||
[[3a1c]] – AfATPase + AMPPCP<br /> | |||
[[3a1d]] - AfATPase + ADP-Mg<br / > | |||
[[3a1e]] - AfATPase (mutant) + AMPPCP<br /> | |||
''Na/K transporting ATPase'' | |||
[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br /> | [[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br /> | ||
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[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish | [[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish | ||
''Ca+2 transporting ATPase'' | |||
[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br /> | [[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br /> | ||
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[[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]] - rATPase HNE2 state+thapsigargin derivative | [[2by4]], [[2yfy]], [[3nal]], [[3nam]], [[3nan]] - rATPase HNE2 state+thapsigargin derivative | ||
''Zn+2 transporting ATPase'' | |||
[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR | [[2ofg]], [[2ofh]] - sATPase N-terminal – NMR | ||
''K+ transporting ATPase'' | |||
[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br /> | [[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br /> | ||
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[[2ynr]] – pATPase – Cryo EM | [[2ynr]] – pATPase – Cryo EM | ||
''As+ transporting ATPase'' | |||
[[1ii0]], [[1f48]] - EcATPase<br /> | [[1ii0]], [[1f48]] - EcATPase<br /> | ||
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[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus'' | [[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus'' | ||
''H+ transporting ATPase'' | |||
[[3b8c]] - AtATPase C terminal truncated<br /> | [[3b8c]] - AtATPase C terminal truncated<br /> | ||
[[1mhs]] - ATPase – ''Neurospora crassa''<br /> | [[1mhs]] - ATPase – ''Neurospora crassa''<br /> | ||
''Na+ transporting ATPase'' | |||
[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br /> | [[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br /> | ||
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[[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus'' | [[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus'' | ||
''H/K transporting ATPase'' | |||
[[1iwc]], [[1iwf]] - pATPase NBD <br /> | [[1iwc]], [[1iwf]] - pATPase NBD <br /> | ||
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[[2xzb]] – pATPase subunits α, β<br /> | [[2xzb]] – pATPase subunits α, β<br /> | ||
''Mg+2 transporting ATPase'' | |||
[[3gwi]] – EcATPase P-1 NBD | [[3gwi]] – EcATPase P-1 NBD | ||
''Arg/ornithine transporting ATPase'' | |||
[[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br /> | [[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br /> | ||
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[[1d8s]] – EcATPase F1<br /> | [[1d8s]] – EcATPase F1<br /> | ||
[[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br /> | [[1vdz]] – PhATPase subunit A – ''Pyrococcus horikoshii''<br /> | ||
===RNA-dependent ATPase=== | ===RNA-dependent ATPase=== |