Phospholipase A2: Difference between revisions
Michal Harel (talk | contribs) No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
[[Image:1yxh.png|left|200px|thumb|Crystal Structure of Phospholipase A2 from ''Naja naja sagittifera'' [[1yxh]]]] | [[Image:1yxh.png|left|200px|thumb|Crystal Structure of Phospholipase A2 from ''Naja naja sagittifera'' [[1yxh]]]] | ||
<StructureSection load='' size='450' side='right' scene=Phospholipase_A2/Cv/1 caption=''> | |||
[[Phospholipase A2]] (PLA2) is an enzyme which releases fatty acids from glycerol. It is found in mammals and in snake venoms. PLA2 releases arachidonic acid from membranes causing inflammation and pain. PLA2 from the snake ''Bothrops jararacussu'' is called '''bothropstoxin (BTX)''' and from ''Bothrops pirajai'' – '''piratoxin (PTX)'''. The '''viperotoxin (VTX)''' is a heterodimer of very homologous PLA2 called '''RV-4/RV-7'''. The intracellular PLA2 – '''cystolic PLA2 (cPLA2)''' – are larger than the secreted PLA2 and contains the targeting C2 domain. The '''pro-phosphlipase (PPLA2)''' is a pancreatic PLA2 whose 7-mer N-terminal peptide is being cleaved off to produce the active PLA2. The PLA2 contains many isozymes which are ordered by groups and named accordingly, ie., group I is PLA2G1. The images at the left and at the right correspond to one representative PLA2, ''i.e.'' the crystal structure of Phospholipase A2 from ''Naja naja sagittifera'' ([[1yxh]]). For details on Lys49 snake-venom PLA2 see [[Anum-II]]. For PLA2 complex see [[Diclofenac binding to Phospholipase A2]]. | [[Phospholipase A2]] (PLA2) is an enzyme which releases fatty acids from glycerol. It is found in mammals and in snake venoms. PLA2 releases arachidonic acid from membranes causing inflammation and pain. PLA2 from the snake ''Bothrops jararacussu'' is called '''bothropstoxin (BTX)''' and from ''Bothrops pirajai'' – '''piratoxin (PTX)'''. The '''viperotoxin (VTX)''' is a heterodimer of very homologous PLA2 called '''RV-4/RV-7'''. The intracellular PLA2 – '''cystolic PLA2 (cPLA2)''' – are larger than the secreted PLA2 and contains the targeting C2 domain. The '''pro-phosphlipase (PPLA2)''' is a pancreatic PLA2 whose 7-mer N-terminal peptide is being cleaved off to produce the active PLA2. The PLA2 contains many isozymes which are ordered by groups and named accordingly, ie., group I is PLA2G1. The images at the left and at the right correspond to one representative PLA2, ''i.e.'' the crystal structure of Phospholipase A2 from ''Naja naja sagittifera'' ([[1yxh]]). For details on Lys49 snake-venom PLA2 see [[Anum-II]]. For PLA2 complex see [[Diclofenac binding to Phospholipase A2]]. | ||
=== Crystal structure of porcine pancreatic phospholipase A<sub>2</sub> in complex with 2-methoxycyclohexa-2-5-diene-1,4-dione ===<ref >DOI 10.1080/21553769.2012.689262</ref> | |||
<scene name='Journal:FLS:1/Cv/1'>Crystal structure of porcine pancreatic phospholipase A2</scene> | |||
<scene name='Journal:FLS:1/Cv/4'>Curcumin</scene> possesses anti-inflammatory activity. The binding of curcumin with PLA<sub>2</sub> was studied using X-ray crystallography. Since the electron density found in the active site did not match with curcumin, <scene name='Journal:FLS:1/Cv/5'>2-methoxycyclohexa-2-5-diene-1,4-dione (MCW)</scene> (the photo-degraded product of curcumin) <scene name='Journal:FLS:1/Cv/6'>was fitted</scene> in the unexplained electron density. To understand the <scene name='Journal:FLS:1/Cv/9'>binding mode of actual curcumin</scene>, molecular docking studies was carried out. <scene name='Journal:FLS:1/Cv/10'>Both crystallographic and docked structures were superimposed</scene> with respect to the ligand position and identified that <scene name='Journal:FLS:1/Cv/13'>curcumin is binding in the hydrophobic cavity</scene> of PLA<sub>2</sub> with a binding energy -16.81 Kcal/mol. The binding mode is in such a manner that it can prevent the entry of substrate to the hydrophobic active site. These studies indicate that curcumin can be act as an inhibitor to PLA<sub>2</sub>. | |||
</StructureSection> | |||
__NOTOC__ | |||
== 3D Structures of Phospholipase A2 == | == 3D Structures of Phospholipase A2 == | ||