1zo1: Difference between revisions
New page: left|200px<br /><applet load="1zo1" size="450" color="white" frame="true" align="right" spinBox="true" caption="1zo1" /> '''IF2, IF1, and tRNA fitted to cryo-EM data OF... |
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[[Image:1zo1.gif|left|200px]]<br /><applet load="1zo1" size=" | [[Image:1zo1.gif|left|200px]]<br /><applet load="1zo1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
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'''IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex'''<br /> | '''IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex'''<br /> | ||
==Overview== | ==Overview== | ||
The 70S ribosome and its complement of factors required for initiation of | The 70S ribosome and its complement of factors required for initiation of translation in E. coli were purified separately and reassembled in vitro with GDPNP, producing a stable initiation complex (IC) stalled after 70S assembly. We have obtained a cryo-EM reconstruction of the IC showing IF2*GDPNP at the intersubunit cleft of the 70S ribosome. IF2*GDPNP contacts the 30S and 50S subunits as well as fMet-tRNA(fMet). IF2 here adopts a conformation radically different from that seen in the recent crystal structure of IF2. The C-terminal domain of IF2 binds to the single-stranded portion of fMet-tRNA(fMet), thereby forcing the tRNA into a novel orientation at the P site. The GTP binding domain of IF2 binds to the GTPase-associated center of the 50S subunit in a manner similar to EF-G and EF-Tu. Additionally, we present evidence for the localization of IF1, IF3, one C-terminal domain of L7/L12, and the N-terminal domain of IF2 in the initiation complex. | ||
==About this Structure== | ==About this Structure== | ||
1ZO1 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http:// | 1ZO1 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZO1 OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
[[Category: Allen, G | [[Category: Allen, G S.]] | ||
[[Category: Ehrenberg, M.]] | [[Category: Ehrenberg, M.]] | ||
[[Category: Frank, J.]] | [[Category: Frank, J.]] | ||
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[[Category: ribosome]] | [[Category: ribosome]] | ||
''Page seeded by [http:// | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:17:28 2008'' |