1ysa: Difference between revisions

Revision as of 20:30, 5 January 2013

Structural annotation:
Resources:	CATH : 1Ysac00, 1Ysad00 InterPro : Ipr011616, Ipr004827 Pfam : PF00170 SCOP : d1ysac_, d1ysad_ UniProt : P03069

Functional annotation:
Cellular component:	nucleus
Biological process:	positive regulation of gene-specific transcription involved in unfolded protein response amino acid biosynthetic process regulation of transcription, DNA-dependent transcription regulation of transcription from RNA polymerase II promoter
Molecular function:	protein dimerization activity transcription factor activity DNA binding sequence-specific DNA binding

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEXTHE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX

Template:ABSTRACT PUBMED 1473154

About this StructureAbout this Structure

1ysa is a 4 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

ReferenceReference

^{[xtra 1]}^{[xtra 2]}

↑ Ellenberger TE, Brandl CJ, Struhl K, Harrison SC. The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex. Cell. 1992 Dec 24;71(7):1223-37. PMID:1473154
↑ Laskowski RA, Thornton JM. Understanding the molecular machinery of genetics through 3D structures. Nat Rev Genet. 2008 Feb;9(2):141-51. PMID:18160966 doi:10.1038/nrg2273

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

[1] Ellenberger TE, Brandl CJ, Struhl K, Harrison SC. The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex. Cell. 1992 Dec 24;71(7):1223-37. PMID:1473154

[2] Laskowski RA, Thornton JM. Understanding the molecular machinery of genetics through 3D structures. Nat Rev Genet. 2008 Feb;9(2):141-51. PMID:18160966 doi:10.1038/nrg2273

[xtra 1]

[xtra 2]

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-{{Seed}}
 [[Image:1ysa.png|left|200px]]
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 {{STRUCTURE_1ysa|  PDB=1ysa  |  SCENE=  }}
 ===THE GCN4 BASIC REGION LEUCINE ZIPPER BINDS DNA AS A DIMER OF UNINTERRUPTED ALPHA HELICES: CRYSTAL STRUCTURE OF THE PROTEIN-DNA COMPLEX===
-<!--
-The line below this paragraph, {{ABSTRACT_PUBMED_1473154}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 1473154 is the PubMed ID number.
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 {{ABSTRACT_PUBMED_1473154}}
 ==About this Structure==
-YSA is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSA OCA].
+[[1ysa]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSA OCA].
 ==Reference==
-<ref group="xtra">PMID:1473154</ref><references group="xtra"/>
+<ref group="xtra">PMID:001473154</ref><ref group="xtra">PMID:018160966</ref><references group="xtra"/>
 [[Category: Saccharomyces cerevisiae]]
 [[Category: Brandl, C J.]]
@@ Line 31: / Line 19: @@
 [[Category: Double helix]]
 [[Category: Protein-dna complex]]
+[[Category: Transcription-dna complex]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 03:04:39 2009''