1dv7: Difference between revisions

Revision as of 12:54, 31 October 2012

Activity:

Orotidine-5'-phosphate decarboxylase, with EC number 4.1.1.23

Related:

Structural annotation:
Resources:	CATH : 1Dv7A00 InterPro : Ipr011060, Ipr014732, Ipr001754, Ipr013785 Pfam : PF00215 SCOP : d1dv7a_ UniProt : O26232

Functional annotation:
Biological process:	pyrimidine nucleotide biosynthetic process 'de novo' pyrimidine base biosynthetic process metabolic process
Molecular function:	carboxy-lyase activity orotidine-5'-phosphate decarboxylase activity catalytic activity lyase activity

Evolutionary conservation:

Toggle Conservation Colors:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Coordinates:

save as pdb, mmCIF, xml

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASECRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE

Template:ABSTRACT PUBMED 10681441

About this StructureAbout this Structure

1dv7 is a 1 chain structure with sequence from Methanothermobacter thermautotrophicus. Full crystallographic information is available from OCA.

ReferenceReference

^{[xtra 1]}^{[xtra 2]}

↑ Wu N, Mo Y, Gao J, Pai EF. Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase. Proc Natl Acad Sci U S A. 2000 Feb 29;97(5):2017-22. PMID:10681441 doi:10.1073/pnas.050417797
↑ Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G, Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH. Structural proteomics of an archaeon. Nat Struct Biol. 2000 Oct;7(10):903-9. PMID:11017201 doi:http://dx.doi.org/10.1038/82823

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OCA

[1] Wu N, Mo Y, Gao J, Pai EF. Electrostatic stress in catalysis: structure and mechanism of the enzyme orotidine monophosphate decarboxylase. Proc Natl Acad Sci U S A. 2000 Feb 29;97(5):2017-22. PMID:10681441 doi:10.1073/pnas.050417797

[2] Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G, Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH. Structural proteomics of an archaeon. Nat Struct Biol. 2000 Oct;7(10):903-9. PMID:11017201 doi:http://dx.doi.org/10.1038/82823

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 {{STRUCTURE_1dv7|  PDB=1dv7  |  SCENE=  }}
 ===CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE===
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 {{ABSTRACT_PUBMED_10681441}}
 ==About this Structure==
-DV7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DV7 OCA].
+[[1dv7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DV7 OCA].
 ==Reference==
-<ref group="xtra">PMID:10681441</ref><references group="xtra"/>
+<ref group="xtra">PMID:010681441</ref><ref group="xtra">PMID:011017201</ref><references group="xtra"/>
 [[Category: Methanothermobacter thermautotrophicus]]
 [[Category: Orotidine-5'-phosphate decarboxylase]]
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 [[Category: Lyase]]
 [[Category: Tim barrel]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:49:30 2009''