Matrix metalloproteinase: Difference between revisions

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==3D structures of matrix metalloproteinase==
==3D structures of matrix metalloproteinase==
''Updated December 2011''


===MMP1 interstitial collagenase===
===MMP1 interstitial collagenase===


[[1su3]] – pro-hMMP – human
[[1su3]] – pro-hMMP – human<br />
[[2clt]] – hMMP (mutant)<br />
[[3shi]] - hMMP catalytic domain


===MMP2 gelatinase-A===
===MMP2 gelatinase-A===
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[[1j7m]] - hMMP third fibronectin type II domain (mutant) – NMR<BR />
[[1j7m]] - hMMP third fibronectin type II domain (mutant) – NMR<BR />
[[1eak]] – pro-hMMP catalytic domain (mutant) + peptide inhibitor<br />
[[1eak]] – pro-hMMP catalytic domain (mutant) + peptide inhibitor<br />
[[3ayu]] - hMMP catalytic domain (mutant) + peptide inhibitor<br />
[[1hov]], [[1eub]] - hMMP catalytic domain + inhibitor– NMR<BR />
[[1hov]], [[1eub]] - hMMP catalytic domain + inhibitor– NMR<BR />
[[1gxd]] – pro-hMMP (mutant) + TIMP-2
[[1gxd]] – pro-hMMP (mutant) + TIMP-2
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[[1qia]], [[1qic]], [[1cqr]], [[1slm]] - hMMP catalytic domain<BR />  
[[1qia]], [[1qic]], [[1cqr]], [[1slm]] - hMMP catalytic domain<BR />  
[[3ohl]], [[3oho]], [[1g49]], [[1ciz]], [[1b8y]], [[1caq]], [[1usn]], [[2usn]], [[1ums]], [[1umt]] hMMP catalytic domain + inhibitor<br />  
[[3ohl]], [[3oho]], [[1g49]], [[1ciz]], [[1b8y]], [[1caq]], [[1usn]], [[2usn]], [[1ums]], [[1umt]],  [[2d1n]], [[2d1o]], [[2ow9]], [[1bqo]], [[1g4k]]  - hMMP catalytic domain + inhibitor<br />  
[[1uea]] - hMMP catalytic domain + TIMP-1<BR />
[[1uea]] - hMMP catalytic domain + TIMP-1<BR />
[[1oo9]] - hMMP catalytic domain + TIMP-1 N terminal<BR />
[[1oo9]] - hMMP catalytic domain + TIMP-1 N terminal<BR />
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===MMP7 matrilysin===
===MMP7 matrilysin===


[[2y6c]], [[2y6d]] – hMMP residues 95-298 + inhibitor<br />
[[2y6c]], [[2y6d]], [[2ddy]] – hMMP residues 95-298 + inhibitor<br />


===MMP8 neutrophil collagenase===
===MMP8 neutrophil collagenase===


[[3dng]], [[3dpe]], [[3dpf]], [[1zp5]], [[1jh1]], [[1jj9]], [[1i76]], [[1a85]], [[1mmb]] – hMMP catalytic domain + inhibitor<br />
[[2oy4]] - hMMP catalytic domain<br />
[[1i73]] - hMMP catalytic domain + peptide inhibitor<br />
[[3dng]], [[3dpe]], [[3dpf]], [[1zp5]], [[1jh1]], [[1jj9]], [[1i76]], [[1a85]], [[1mmb]], [[1zs0]], [[1zvx]] – hMMP catalytic domain + inhibitor<br />
[[1i73]], [[2oy2]] - hMMP catalytic domain + peptide inhibitor<br />


===MMP9 gelatinase-B===
===MMP9 gelatinase-B===
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[[2jxy]] - hMMP hemopexin-like domain - NMR<BR />
[[2jxy]] - hMMP hemopexin-like domain - NMR<BR />
[[3n2u]], [[3n2v]], [[2wo8]], [[2wo9]], [[2woa]], [[1utt]], [[1utz]], [[1ros]] – hMMP catalytic domain + inhibitor<br />
[[3n2u]], [[3n2v]], [[2wo8]], [[2wo9]], [[2woa]], [[1utt]], [[1utz]], [[1ros]] – hMMP catalytic domain + inhibitor<br />
[[3lk8]], [[3lik]], [[3lil]], [[3lir]], [[3ljg]], [[3nx7]], [[3lka]], [[3ehx]], [[3ehy]], [[3f15]], [[3f16]], [[3f17]], [[3f18]], [[3f19]], [[3f1a]], [[1y93]], [[1rmz]], [[1os2]], [[1os9]] - hMMP catalytic domain (mutant) + inhibitor<br />
[[3lk8]], [[3lik]], [[3lil]], [[3lir]], [[3ljg]], [[3nx7]], [[3lka]], [[3ehx]], [[3ehy]], [[3f15]], [[3f16]], [[3f17]], [[3f18]], [[3f19]], [[3f1a]], [[1y93]], [[1rmz]], [[1os2]], [[1os9]], [[2hu6]] - hMMP catalytic domain (mutant) + inhibitor<br />
[[2oxn]], [[2oxz]] - hMMP catalytic domain (mutant) + peptide<br />
[[2k2g]], [[2z2d]] - hMMP catalytic domain + inhibitor - NMR<BR />
[[2k2g]], [[2z2d]] - hMMP catalytic domain + inhibitor - NMR<BR />
[[2w0d]], [[1ycm]], [[1z3j]] - hMMP catalytic domain (mutant) + inhibitor - NMR<BR />
[[2w0d]], [[1ycm]], [[1z3j]] - hMMP catalytic domain (mutant) + inhibitor - NMR<BR />
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[[1cxv]] - MMP catalytic domain - mouse<BR />
[[1cxv]] - MMP catalytic domain - mouse<BR />
[[2yig]], [[3ljz]], [[3kec]], [[3kej]], [[3kek]], [[3kry]], [[3i7g]], [[3i7i]], [[3elm]], [[2pjt]], [[2ozr]], [[1xuc]], [[1xud]], [[1xur]], [[1you]] – hMMP catalytic domain + inhibitor<br />  
[[2yig]], [[3ljz]], [[3kec]], [[3kej]], [[3kek]], [[3kry]], [[3i7g]], [[3i7i]], [[3elm]], [[2pjt]], [[2ozr]], [[1xuc]], [[1xud]], [[1xur]], [[1you]], [[1ztq]], [[3o2x]], [[3zxh]] – hMMP catalytic domain + inhibitor<br />  


===MMP14 Membrane T1===
===MMP14 Membrane T1===
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[[2k72]] – hMMP residues 254-290 - NMR<BR />
[[2k72]] – hMMP residues 254-290 - NMR<BR />
===MMP adamalysin===
[[1aig]] – MMP – diamondback rattlesnake


==References==
==References==

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky