1gt7: Difference between revisions
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[[Image:1gt7.gif|left|200px]]<br /><applet load="1gt7" size=" | [[Image:1gt7.gif|left|200px]]<br /><applet load="1gt7" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1gt7, resolution 2.7Å" /> | caption="1gt7, resolution 2.7Å" /> | ||
'''L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI'''<br /> | '''L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
1GT7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with ZN and PGH as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Rhamnulose-1-phosphate_aldolase Rhamnulose-1-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.19 4.1.2.19] Known structural/functional Site: <scene name='pdbsite=ZNA:Pgh Binding Site For Chain T'>ZNA</scene>. Full crystallographic information is available from [http:// | 1GT7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=PGH:'>PGH</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Rhamnulose-1-phosphate_aldolase Rhamnulose-1-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.19 4.1.2.19] Known structural/functional Site: <scene name='pdbsite=ZNA:Pgh+Binding+Site+For+Chain+T'>ZNA</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GT7 OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: zinc enzyme]] | [[Category: zinc enzyme]] | ||
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Revision as of 10:42, 3 February 2008
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L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI
OverviewOverview
The enzyme L-rhamnulose-1-phosphate aldolase catalyzes the reversible, cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate and, L-lactaldehyde. It is a homotetramer with an M(r) of 30 000 per subunit, and crystallized in space group P3(2)21. The enzyme shows a low sequence, identity of 18% with the structurally known L-fuculose-1-phosphate, aldolase that splits a stereoisomer in a similar reaction. Structure, analysis was initiated with a single heavy-atom derivative measured to 6 A, resolution. The resulting poor electron density, a self-rotation function, and the working hypothesis that both enzymes are C(4) symmetric with, envelopes that resemble one another allowed the location of the 20, protomers of the asymmetric unit. The crystal-packing unit was a, D(4)-symmetric propeller consisting of five D(4)-symmetric octamers around, an internal crystallographic twofold axis. Presumably, the propellers, associate laterally in layers, which in turn pile up along the 3(2) axis, to form the crystal. The non-crystallographic symmetry was used to extend, the phases to the 2.7 A resolution limit and to establish a refined atomic, model of the enzyme. The structure showed that the two enzymes are indeed, homologous and that they possess chemically similar active centres.
About this StructureAbout this Structure
1GT7 is a Single protein structure of sequence from Escherichia coli with and as ligands. Active as Rhamnulose-1-phosphate aldolase, with EC number 4.1.2.19 Known structural/functional Site: . Full crystallographic information is available from OCA.
ReferenceReference
The structure of L-rhamnulose-1-phosphate aldolase (class II) solved by low-resolution SIR phasing and 20-fold NCS averaging., Kroemer M, Schulz GE, Acta Crystallogr D Biol Crystallogr. 2002 May;58(Pt 5):824-32. Epub 2002, Apr 26. PMID:11976494
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