1grv: Difference between revisions
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[[Image:1grv.jpg|left|200px]]<br /><applet load="1grv" size=" | [[Image:1grv.jpg|left|200px]]<br /><applet load="1grv" size="350" color="white" frame="true" align="right" spinBox="true" | ||
caption="1grv, resolution 2.9Å" /> | caption="1grv, resolution 2.9Å" /> | ||
'''HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM E. COLI'''<br /> | '''HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM E. COLI'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
1GRV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with MG as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Hypoxanthine_phosphoribosyltransferase Hypoxanthine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.8 2.4.2.8] Known structural/functional Site: <scene name='pdbsite=MGA:Mg Binding Site For Chain B'>MGA</scene>. Full crystallographic information is available from [http:// | 1GRV is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Hypoxanthine_phosphoribosyltransferase Hypoxanthine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.8 2.4.2.8] Known structural/functional Site: <scene name='pdbsite=MGA:Mg Binding Site For Chain B'>MGA</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GRV OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: transferase]] | [[Category: transferase]] | ||
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Revision as of 16:23, 23 January 2008
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HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE FROM E. COLI
OverviewOverview
Crystal structures have been determined for free Escherichia coli, hypoxanthine phosphoribosyltransferase (HPRT) (2.9 A resolution) and for, the enzyme in complex with the reaction products, inosine 5'-monophosphate, (IMP) and guanosine 5'-monophosphate (GMP) (2.8 A resolution). Of the, known 6-oxopurine phosphoribosyltransferase (PRTase) structures, E. coli, HPRT is most similar in structure to that of Tritrichomonas foetus HGXPRT, with a rmsd for 150 Calpha atoms of 1.0 A. Comparison of the free and, product bound structures shows that the side chain of Phe156 and the, polypeptide backbone in this vicinity move to bind IMP or GMP. A, nonproline cis peptide bond, also found in some other 6-oxopurine PRTases, is observed between Leu46 and Arg47 in both the free and complexed, structures. For catalysis to occur, the 6-oxopurine PRTases have a, requirement for divalent metal ion, usually Mg(2+) in vivo. In the free, structure, a Mg(2+) is coordinated to the side chains of Glu103 and, Asp104. This interaction may be important for stabilization of the enzyme, before catalysis. E. coli HPRT is unique among the known 6-oxopurine, PRTases in that it exhibits a marked preference for hypoxanthine as, substrate over both xanthine and guanine. The structures suggest that its, substrate specificity is due to the modes of binding of the bases. In E., coli HPRT, the carbonyl oxygen of Asp163 would likely form a hydrogen bond, with the 2-exocyclic nitrogen of guanine (in the, HPRT-guanine-PRib-PP-Mg(2+) complex). However, hypoxanthine does not have, a 2-exocyclic atom and the HPRT-IMP structure suggests that hypoxanthine, is likely to occupy a different position in the purine-binding pocket.
About this StructureAbout this Structure
1GRV is a Single protein structure of sequence from Escherichia coli with as ligand. Active as Hypoxanthine phosphoribosyltransferase, with EC number 2.4.2.8 Known structural/functional Site: . Full crystallographic information is available from OCA.
ReferenceReference
Crystal structures of free, IMP-, and GMP-bound Escherichia coli hypoxanthine phosphoribosyltransferase., Guddat LW, Vos S, Martin JL, Keough DT, de Jersey J, Protein Sci. 2002 Jul;11(7):1626-38. PMID:12070315
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