User:David Canner/Sandbox good: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
David Canner (talk | contribs)
No edit summary
David Canner (talk | contribs)
No edit summary
Line 1: Line 1:
==How to Make Excellent Scenes==
==How to Make Excellent Scenes==


This is a list of tips and tricks to develop effective scenes for your pages.  
This is a list of tips and tricks to develop effective scenes for your pages. The scenes below were taken from other pages with effective scenes. 


==Scene Transitions==
==Scene Transitions==

Revision as of 12:07, 21 November 2010

How to Make Excellent Scenes

This is a list of tips and tricks to develop effective scenes for your pages. The scenes below were taken from other pages with effective scenes.

Scene Transitions

Smooth Transitions

Tip #1: When developing a series of scenes illustrating related parts of a protein, use the “transition options” to create smooth transitions void of peculiar zoom-outs, etc.

Example from the page HMG-CoA Reductase:

The HMG binding pocket is the site of catalysis in HMGR. is a critical structural element of this binding site. Residues and are positioned in the active site as is . It is this K691 that likely stabilizes the negatively charged oxygen of the first mevaldyl-CoA intermediate. The mevaldyl CoA intermediate is subsequently converted to Mavaldehyde with added stabilization from . It is then believed that the close proximity of increases the pKA of E559, allowing it to be a proton donor for the reduction of mevaldehyde into mevalonate.

Compared with:

The HMG binding pocket is the site of catalysis in HMGR. is a critical structural element of this binding site. Residues and are positioned in the active site as is . Etc…

Tip #2:

Example from the page

Compared with:

Tip #3:

Example from the page

Compared with:

Tip #4:

Example from the page

Compared with:



Structure of HMG-CoA reductase (PDB entry 1dq8)

Drag the structure with the mouse to rotate