3kbp: Difference between revisions
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[[Image:3kbp. | [[Image:3kbp.jpg|left|200px]]<br /><applet load="3kbp" size="450" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="3kbp" size="450" color="white" frame="true" align="right" spinBox="true" | |||
caption="3kbp, resolution 3.0Å" /> | caption="3kbp, resolution 3.0Å" /> | ||
'''KIDNEY BEAN PURPLE ACID PHOSPHATASE'''<br /> | '''KIDNEY BEAN PURPLE ACID PHOSPHATASE'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
3KBP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Phaseolus_vulgaris Phaseolus vulgaris] with NAG, FE, ZN and WO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Acid_phosphatase Acid phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.2 3.1.3.2] | 3KBP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Phaseolus_vulgaris Phaseolus vulgaris] with NAG, FE, ZN and WO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Acid_phosphatase Acid phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.2 3.1.3.2] Known structural/functional Sites: <scene name='pdbsite=ACA:Phosphatase Active Site'>ACA</scene>, <scene name='pdbsite=ACB:Phosphatase Active Site'>ACB</scene>, <scene name='pdbsite=ACC:Phosphatase Active Site'>ACC</scene> and <scene name='pdbsite=ACD:Phosphatase Active Site'>ACD</scene>. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=3KBP OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: purple acid phosphatase]] | [[Category: purple acid phosphatase]] | ||
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Revision as of 21:30, 18 December 2007
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KIDNEY BEAN PURPLE ACID PHOSPHATASE
OverviewOverview
Purple acid phosphatase is a widely distributed non-specific, phosphomonoesterase. X-ray structures of the dimeric 111-kDa, Fe(III)-Zn(II) kidney bean purple acid phosphatase (kbPAP) complexed with, phosphate, the product of the reaction, and with tungstate, a strong, inhibitor of the phosphatase activity, were determined at 2.7 and 3.0, angstroms resolution, respectively. Furthermore the resolution of the, unligated enzyme, recently solved at 2.9 angstroms could be extended to, 2.65 angstroms with completely new data. The binding of both oxoanions is, not accompanied by larger conformational changes in the enzyme structure., Small movements with a maximal coordinate shift of 1 angstroms are only, observed for the active site residues His295 and His296. In the inhibitor, complex as well as in the product complex, the oxoanion binds in a, bidentate bridging mode to the two metal ions, replacing two of the, presumed solvent ligands present in the unligated enzyme form. As also, proposed for the unligated structure a bridging hydroxide ion completes, the coordination spheres of both metal ions to octahedral arrangements., All three structures reported herein support a mechanism of phosphate, ester hydrolysis involving interaction of the substrate with Zn(II), followed by a nucleophilic attack on the phosphorus by an, Fe(III)-coordinated hydroxide ion. The negative charge evolving at the, pentacoordinated transition state is probably stabilized by interactions, with the divalent zinc and the imidazole groups of His202, His295, and, His296, the latter protonating the leaving alcohol group.
About this StructureAbout this Structure
3KBP is a Single protein structure of sequence from Phaseolus vulgaris with NAG, FE, ZN and WO4 as ligands. Active as Acid phosphatase, with EC number 3.1.3.2 Known structural/functional Sites: , , and . Full crystallographic information is available from OCA.
ReferenceReference
Mechanism of Fe(III)-Zn(II) purple acid phosphatase based on crystal structures., Klabunde T, Strater N, Frohlich R, Witzel H, Krebs B, J Mol Biol. 1996 Jun 21;259(4):737-48. PMID:8683579
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