2fus: Difference between revisions
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[[Image:2fus. | [[Image:2fus.jpg|left|200px]]<br /><applet load="2fus" size="450" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="2fus" size="450" color="white" frame="true" align="right" spinBox="true" | |||
caption="2fus, resolution 2.2Å" /> | caption="2fus, resolution 2.2Å" /> | ||
'''MUTATIONS OF FUMARASE THAT DISTINGUISH BETWEEN THE ACTIVE SITE AND A NEARBY DICARBOXYLIC ACID BINDING SITE'''<br /> | '''MUTATIONS OF FUMARASE THAT DISTINGUISH BETWEEN THE ACTIVE SITE AND A NEARBY DICARBOXYLIC ACID BINDING SITE'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
2FUS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with CIT as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Fumarate_hydratase Fumarate hydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.2 4.2.1.2] | 2FUS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with CIT as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Fumarate_hydratase Fumarate hydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.2 4.2.1.2] Known structural/functional Site: <scene name='pdbsite=S1:The Active Site Is generat. From Three Of Four Subunits ...'>S1</scene>. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2FUS OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: kreb's cycle enzyme]] | [[Category: kreb's cycle enzyme]] | ||
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Revision as of 20:22, 18 December 2007
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MUTATIONS OF FUMARASE THAT DISTINGUISH BETWEEN THE ACTIVE SITE AND A NEARBY DICARBOXYLIC ACID BINDING SITE
OverviewOverview
Two mutant forms of fumarase C from E. coli have been made using PCR and, recombinant DNA. The recombinant form of the protein included a histidine, arm on the C-terminal facilitating purification. Based on earlier studies, two different carboxylic acid binding sites, labeled A- and B-, were, observed in crystal structures of the wild type and inhibited forms of the, enzyme. A histidine at each of the sites was mutated to an asparagine., H188N at the A-site resulted in a large decrease in specific activity, while the H129N mutation at the B-site had essentially no effect. From the, results, we conclude that the A-site is indeed the active site, and a dual, role for H188 as a potential catalytic base is proposed. Crystal, structures of the two mutant proteins produced some unexpected results., Both mutations reduced the affinity for the carboxylic acids at their, respective sites. The H129N mutant should be particularly useful in future, kinetic studies because it sterically blocks the B-site with the, carboxyamide of asparagine assuming the position of the ligand's, carboxylate. In the H188N mutation at the active site, the new asparagine, side chain still interacts with an active site water that appears to have, moved slightly as a result of the mutation.
About this StructureAbout this Structure
2FUS is a Single protein structure of sequence from Escherichia coli with CIT as ligand. Active as Fumarate hydratase, with EC number 4.2.1.2 Known structural/functional Site: . Full crystallographic information is available from OCA.
ReferenceReference
Mutations of fumarase that distinguish between the active site and a nearby dicarboxylic acid binding site., Weaver T, Lees M, Banaszak L, Protein Sci. 1997 Apr;6(4):834-42. PMID:9098893
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