1qjd: Difference between revisions
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[[Image:1qjd. | [[Image:1qjd.jpg|left|200px]]<br /><applet load="1qjd" size="450" color="white" frame="true" align="right" spinBox="true" | ||
<applet load="1qjd" size="450" color="white" frame="true" align="right" spinBox="true" | |||
caption="1qjd, resolution 1.80Å" /> | caption="1qjd, resolution 1.80Å" /> | ||
'''FLAVOCYTOCHROME C3 FROM SHEWANELLA FRIGIDIMARINA'''<br /> | '''FLAVOCYTOCHROME C3 FROM SHEWANELLA FRIGIDIMARINA'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
1QJD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_frigidimarina Shewanella frigidimarina] with NA, HEC, FAD, TEO and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. | 1QJD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_frigidimarina Shewanella frigidimarina] with NA, HEC, FAD, TEO and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=SBS:Substrate Binding Site'>SBS</scene>. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1QJD OCA]. | ||
==Reference== | ==Reference== | ||
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[[Category: respiratory fumarate reductase]] | [[Category: respiratory fumarate reductase]] | ||
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Dec 18 17:53:51 2007'' | ||
Revision as of 18:44, 18 December 2007
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FLAVOCYTOCHROME C3 FROM SHEWANELLA FRIGIDIMARINA
OverviewOverview
The 1.8 A resolution crystal structure of the tetraheme flavocytochrome, c3, Fcc3, provides the first mechanistic insight into respiratory fumarate, reductases or succinate dehydrogenases. The multi-redox center, three-domain protein shows a 40 A long 'molecular wire' allowing rapid, conduction of electrons through a new type of cytochrome domain onto the, active site flavin, driving the reduction of fumarate to succinate. In, this structure a malate-like molecule is trapped in the enzyme active, site. The interactions between this molecule and the enzyme suggest a, clear mechanism for fumarate reduction in which the substrate is polarized, and twisted, facilitating hydride transfer from the reduced flavin and, subsequent proton transfer. The enzyme active site in the oxidized form is, completely buried at the interface between the flavin-binding and the, clamp domains. Movement of the cytochrome and clamp domains is postulated, to allow release of the product.
About this StructureAbout this Structure
1QJD is a Single protein structure of sequence from Shewanella frigidimarina with NA, HEC, FAD, TEO and GOL as ligands. Known structural/functional Site: . Full crystallographic information is available from OCA.
ReferenceReference
Structural and mechanistic mapping of a unique fumarate reductase., Taylor P, Pealing SL, Reid GA, Chapman SK, Walkinshaw MD, Nat Struct Biol. 1999 Dec;6(12):1108-12. PMID:10581550
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