Intrinsically Disordered Protein: Difference between revisions
Eric Martz (talk | contribs) →Prediction Servers: added description for DISOPRED2 |
Eric Martz (talk | contribs) →Prediction Servers: added description for IUPred |
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* [http://bip.weizmann.ac.il/fldbin/findex/ FoldIndex]<ref name="foldindex" /> makes predictions based on the observation that IUPs occupy the low hydrophobicity/ high net-charge portion of charge-hydrophobicity phase space. (See Figure above.) | * [http://bip.weizmann.ac.il/fldbin/findex/ FoldIndex]<ref name="foldindex" /> makes predictions based on the observation that IUPs occupy the low hydrophobicity/ high net-charge portion of charge-hydrophobicity phase space. (See Figure above.) | ||
* [http://iupred.enzim.hu/ IUPred] | * [http://iupred.enzim.hu/ IUPred] (Dosztányi, Csizmók, Tompa and Simon: Budapest, Hungary) "IUPred recognized intrinsically unstructured regions from the amino acid sequence based on the estimated pairwise energy content. The underlying assumption is that globular proteins are composed of amino acids which have the potential to form a large number of favorable interactions, whereas intrinsically unstructured proteins (IUPs) adopt no stable structure because their amino acid composition does not allow sufficient favorable interactions to form." (Quoted from the IUPred website.) | ||
* [http://www.pondr.com/ PONDR] | * [http://www.pondr.com/ PONDR] | ||