User:Wayne Decatur/Biochem642 Molecular Visualization Sessions: Difference between revisions
| Line 66: | Line 66: | ||
*[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jmol_app.htm Jmol Application] | *[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jmol_app.htm Jmol Application] | ||
*[http://pymol.org/ Pymol] | *[http://pymol.org/ Pymol] | ||
*[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy [http://pymol.org/ Pymol] views and animations made super easy via a | *[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy [http://pymol.org/ Pymol] views and animations made super easy via a web server with forms. | ||
*Swiss-pdb Viewer a.k.a Deep View | *Swiss-pdb Viewer a.k.a Deep View | ||
*Protein Explorer | *Protein Explorer | ||
| Line 81: | Line 81: | ||
*[http://chemapps.stolaf.edu/jmol/docs/ Jmol Command Reference Manual] for advanced scene authoring in Jmol using commands because [http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jtatdocs.htm#directscripting direct scripting works for Proteopedia too]. | *[http://chemapps.stolaf.edu/jmol/docs/ Jmol Command Reference Manual] for advanced scene authoring in Jmol using commands because [http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jtatdocs.htm#directscripting direct scripting works for Proteopedia too]. | ||
*[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/index.htm Jmol Tutorial-Authoring Template (JTAT)] describes and works for developing and viewing scenes offline or developing and viewing privately. | *[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/index.htm Jmol Tutorial-Authoring Template (JTAT)] describes and works for developing and viewing scenes offline or developing and viewing privately. | ||
*[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy Pymol views and animations made super easy. | *[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy [http://pymol.org/ Pymol] views and animations made super easy via a webs erver with forms. | ||
*[http://www.weizmann.ac.il/ISPC/eMovie.html eMovie],a PyMOL plug-in for macromolecular movie-making. | *[http://www.weizmann.ac.il/ISPC/eMovie.html eMovie],a PyMOL plug-in for macromolecular movie-making. | ||