User:Michael Strong/H1N1/NA: Difference between revisions

New page: <pre> >gb|ACO25038.1| neuraminidase [Influenza A virus (A/swine/England/WVL14/1996(H1N1))] Length=468 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Iden...
 
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             FWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK
             FWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK
Sbjct  421  FWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK  468
Sbjct  421  FWVELIRGRPKENTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK  468
>gb|ACQ42240.1|  neuraminidase [Influenza A virus (A/Auckland/1/2009(H1N1))]
Length=447
Score =  909 bits (2349),  Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/447 (99%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query  23  ILQIGNIISIWISHSIQLGNQNQIETCNQSVITYENNTWVNQTYVNISNTNFAAGQSVVS  82
            ILQIGNIISIWISHSIQLGNQNQIETCNQSVITYENNTWVNQTYVNISNTNFAAGQSVVS
Sbjct  1    ILQIGNIISIWISHSIQLGNQNQIETCNQSVITYENNTWVNQTYVNISNTNFAAGQSVVS  60
Query  83  VKLAGNSSLCPVSGWAIYSKDNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLND  142
            VKLAGNSSLCPVSGWAIYSKDNS+RIGSKGDVFVIREPFISCSPLECRTFFLTQGALLND
Sbjct  61  VKLAGNSSLCPVSGWAIYSKDNSIRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLND  120
Query  143  KHSNGTIKDRSPYRTLMSCPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGA  202
            KHSNGTIKDRSPYRTLMSCPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGA
Sbjct  121  KHSNGTIKDRSPYRTLMSCPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGA  180
Query  203  VAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGK  262
            VAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPS+GQASYKIFRIEKGK
Sbjct  181  VAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSDGQASYKIFRIEKGK  240
Query  263  IVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIF  322
            IVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIF
Sbjct  241  IVKSVEMNAPNYHYEECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIF  300
Query  323  GDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTG  382
            GDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTG
Sbjct  301  GDNPRPNDKTGSCGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTG  360
Query  383  TDNNFSIKQDIVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSS  442
            TDNNFSIKQDIVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSS
Sbjct  361  TDNNFSIKQDIVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSS  420
Query  443  ISFCGVNSDTVGWSWPDGAELPFTIDK  469
            ISFCGVNSDTVGWSWPDGAELPFTIDK
Sbjct  421  ISFCGVNSDTVGWSWPDGAELPFTIDK  447