User:James D Watson/Using Jmol: Difference between revisions

Line 38:

In order to change the display you need to "render" your selection. To render, access the Jmol main menu again and place the cursor over '''''~~Render~~''''' to see its sub-menu. Move the cursor to '''''Atoms''''' then click on '''''100% ~~vanderWaals~~'''''. The menu will disappear and the display will change so that each atom is represented as a solid sphere (commonly called "spacefill").

In order to change the display you need to "render" your selection. To render, access the Jmol main menu again and place the cursor over '''''Style''''' to see its sub-menu. Move the cursor to '''''Atoms''''' then click on '''''100% van der Waals'''''. The menu will disappear and the display will change so that each atom is represented as a solid sphere (commonly called "spacefill").

Try this for yourself and if you want to check that your menu selections worked correctly you can click on the "Check Section" links. These will change the Jmol image to show what the menu selections should have resulted in.

From now on we will represent successive menu selections in the following way:

From now on we will represent successive menu selections in the following way:

'''''Select | All'''''

'''''Select | All'''''

'''''Render | Atoms | 100% vanderWaals'''''

'''''Render | Atoms | 100% vanderWaals'''''

~~Will~~ repeat the steps taken above.

This will repeat the steps taken above. "Check Section".

If you wished to undo the above selection then make the following menu choices:

'''''Select | All'''''

'''''Render | Atoms | Off'''''

~~Select | All~~

~~Render | Atoms | Off~~

@@ Line 38: / Line 38: @@
 <br/>
 <br/>
-In order to change the display you need to "render" your selection. To render, access the Jmol main menu again and place the cursor over '''''Render''''' to see its sub-menu. Move the cursor to '''''Atoms''''' then click on '''''100% vanderWaals'''''. The menu will disappear and the display will change so that each atom is represented as a solid sphere (commonly called "spacefill").<br/>
+In order to change the display you need to "render" your selection. To render, access the Jmol main menu again and place the cursor over '''''Style''''' to see its sub-menu. Move the cursor to '''''Atoms''''' then click on '''''100% van der Waals'''''. The menu will disappear and the display will change so that each atom is represented as a solid sphere (commonly called "spacefill").<br/>
 <br/>
 Try this for yourself and if you want to check that your menu selections worked correctly you can click on the "Check Section" links. These will change the Jmol image to show what the menu selections should have resulted in.<br/>
 <br/>
-From now on we will represent successive menu selections in the following way:
+From now on we will represent successive menu selections in the following way:<br/>
-'''''Select | All'''''
+'''''Select | All'''''<br/>
-'''''Render | Atoms | 100% vanderWaals'''''
+'''''Render | Atoms | 100% vanderWaals'''''<br/>
-Will repeat the steps taken above.<br/>
+<br/>
+<br/>
+This will repeat the steps taken above. "Check Section".<br/>
+<br/>
+If you wished to undo the above selection then make the following menu choices:<br/>
+'''''Select | All'''''<br/>
+'''''Render | Atoms | Off'''''<br/>
+<br/>
 <br/>
-Select | All
-Render | Atoms | Off