1um0: Difference between revisions

New page: left|200px<br /><applet load="1um0" size="450" color="white" frame="true" align="right" spinBox="true" caption="1um0, resolution 1.95Å" /> '''Crystal structure of...
 
No edit summary
Line 1: Line 1:
[[Image:1um0.jpg|left|200px]]<br /><applet load="1um0" size="450" color="white" frame="true" align="right" spinBox="true"  
[[Image:1um0.jpg|left|200px]]<br /><applet load="1um0" size="350" color="white" frame="true" align="right" spinBox="true"  
caption="1um0, resolution 1.95&Aring;" />
caption="1um0, resolution 1.95&Aring;" />
'''Crystal structure of chorismate synthase complexed with FMN'''<br />
'''Crystal structure of chorismate synthase complexed with FMN'''<br />


==Overview==
==Overview==
Chorismate synthase catalyzes the conversion of 5-enolpyruvylshikimate, 3-phosphate to chorismate in the shikimate pathway, which represents an, attractive target for discovering antimicrobial agents and herbicides., Chorismate serves as a common precursor for the synthesis of aromatic, amino acids and many aromatic compounds in microorganisms and plants., Chorismate synthase requires reduced FMN as a cofactor but the catalyzed, reaction involves no net redox change. Here, we have determined the, crystal structure of chorismate synthase from Helicobacter pylori in both, FMN-bound and FMN-free forms. It is a tetrameric enzyme, with each monomer, possessing a novel "beta-alpha-beta sandwich fold". Highly conserved, regions, including several flexible loops, cluster together around the, bound FMN to form the active site. The unique FMN-binding site is formed, largely by a single subunit, with a small contribution from a neighboring, subunit. The isoalloxazine ring of the bound FMN is significantly, non-planar. Our structure illuminates the essential functional roles, played by the cofactor.
Chorismate synthase catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate to chorismate in the shikimate pathway, which represents an attractive target for discovering antimicrobial agents and herbicides. Chorismate serves as a common precursor for the synthesis of aromatic amino acids and many aromatic compounds in microorganisms and plants. Chorismate synthase requires reduced FMN as a cofactor but the catalyzed reaction involves no net redox change. Here, we have determined the crystal structure of chorismate synthase from Helicobacter pylori in both FMN-bound and FMN-free forms. It is a tetrameric enzyme, with each monomer possessing a novel "beta-alpha-beta sandwich fold". Highly conserved regions, including several flexible loops, cluster together around the bound FMN to form the active site. The unique FMN-binding site is formed largely by a single subunit, with a small contribution from a neighboring subunit. The isoalloxazine ring of the bound FMN is significantly non-planar. Our structure illuminates the essential functional roles played by the cofactor.


==About this Structure==
==About this Structure==
1UM0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori] with FMN as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Chorismate_synthase Chorismate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.5 4.2.3.5] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1UM0 OCA].  
1UM0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori] with <scene name='pdbligand=FMN:'>FMN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Chorismate_synthase Chorismate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.5 4.2.3.5] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UM0 OCA].  


==Reference==
==Reference==
Line 14: Line 14:
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Ahn, H.J.]]
[[Category: Ahn, H J.]]
[[Category: Lee, B.]]
[[Category: Lee, B.]]
[[Category: Suh, S.W.]]
[[Category: Suh, S W.]]
[[Category: Yoon, H.J.]]
[[Category: Yoon, H J.]]
[[Category: FMN]]
[[Category: FMN]]
[[Category: beta-alpha-beta sandwich fold]]
[[Category: beta-alpha-beta sandwich fold]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 04:14:07 2007''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:26:01 2008''

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA