User:Eric Martz/Cavities tests: Difference between revisions
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The missing loops are 202-205 (NGSV), 226-231 (EQATSW), and 268-275 (TIKGSDET). These gaps, which occur between the residues marked /\ below, were apparently ignored in making the model, which has a continuous main chain. | The missing loops are 202-205 (NGSV), 226-231 (EQATSW), and 268-275 (TIKGSDET). These gaps, which occur between the residues marked /\ below, were apparently ignored in making the model, which has a continuous main chain. | ||
Below is the alignment produced by Swiss Model, used in making the 3D model. Vertical bars for identity were inserted by hand. | |||
<pre> | <pre> | ||
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2qgzA hh h ssssss hhhhhhhhhh | 2qgzA hh h ssssss hhhhhhhhhh | ||
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TARGET 194 SKRPTGMLTN SNMEEMTKLL ---GERVMDR MRLGNSLWVI FNWDSYR | TARGET 194 SKRPTGMLTN SNMEEMTKLL ---GERVMDR MRLGNSLWVI FNWDSYR | ||
2qgzA 247 eelptfftsn ysfadlerkw awqakrvmer vr-ylarefh leganrr- | 2qgzA 247 eelptfftsn ysfadlerkw awqakrvmer vr-ylarefh leganrr- | ||