3dox: Difference between revisions

Revision as of 10:33, 10 September 2008

This article has been automatically seeded. Changes to this page should pertain to the PDB entry only and not to the protein or biomolecule in general.

File:3dox.jpg

Template:STRUCTURE 3dox

X-ray structure of HIV-1 protease in situ product complexX-ray structure of HIV-1 protease in situ product complex

Template:ABSTRACT PUBMED 18704947

About this StructureAbout this Structure

3DOX is a Protein complex structure of sequences from Human immunodeficiency virus type 1 (isolate hxb2 group m subtype b). Full crystallographic information is available from OCA.

ReferenceReference

X-ray structure of HIV-1 protease in situ product complex., Bihani S, Das A, Prashar V, Ferrer JL, Hosur MV, Proteins. 2008 Aug 14. PMID:18704947

1.9 A x-ray study shows closed flap conformation in crystals of tethered HIV-1 PR., Pillai B, Kannan KK, Hosur MV, Proteins. 2001 Apr 1;43(1):57-64. PMID:11170214

Observation of a tetrahedral reaction intermediate in the HIV-1 protease-substrate complex., Kumar M, Prashar V, Mahale S, Hosur MV, Biochem J. 2005 Jul 15;389(Pt 2):365-71. PMID:15794743

Rapid screening for HIV-1 protease inhibitor leads through X-ray diffraction., Pillai B, Kannan KK, Bhat SV, Hosur MV, Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):594-6. Epub 2004, Feb 25. PMID:14993705

Crystal structure of HIV-1 protease in situ product complex and observation of a low-barrier hydrogen bond between catalytic aspartates., Das A, Prashar V, Mahale S, Serre L, Ferrer JL, Hosur MV, Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18464-9. Epub 2006 Nov 20. PMID:17116869

Page seeded by OCA on Wed Sep 10 10:33:05 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-'''Unreleased structure'''
+{{Seed}}
+[[Image:3dox.jpg|left|200px]]
-The entry 3dox is ON HOLD  until Paper Publication
+<!--
+The line below this paragraph, containing "STRUCTURE_3dox", creates the "Structure Box" on the page.
+You may change the PDB parameter (which sets the PDB file loaded into the applet)
+or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+or leave the SCENE parameter empty for the default display.
+-->
+{{STRUCTURE_3dox|  PDB=3dox  |  SCENE=  }}
-Authors: Bihani, S.C., Das, A., Prashar, V., Ferrer, J.L., Hosur, M.V.
+===X-ray structure of HIV-1 protease in situ product complex===
-Description: X-ray structure of HIV-1 protease in situ product complex
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 23 12:15:59 2008''
+<!--
+The line below this paragraph, {{ABSTRACT_PUBMED_18704947}}, adds the Publication Abstract to the page
+(as it appears on PubMed at http://www.pubmed.gov), where 18704947 is the PubMed ID number.
+-->
+{{ABSTRACT_PUBMED_18704947}}
+==About this Structure==
+DOX is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_type_1_(isolate_hxb2_group_m_subtype_b) Human immunodeficiency virus type 1 (isolate hxb2 group m subtype b)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DOX OCA].
+==Reference==
+X-ray structure of HIV-1 protease in situ product complex., Bihani S, Das A, Prashar V, Ferrer JL, Hosur MV, Proteins. 2008 Aug 14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18704947 18704947]
+.9 A x-ray study shows closed flap conformation in crystals of tethered HIV-1 PR., Pillai B, Kannan KK, Hosur MV, Proteins. 2001 Apr 1;43(1):57-64. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11170214 11170214]
+Observation of a tetrahedral reaction intermediate in the HIV-1 protease-substrate complex., Kumar M, Prashar V, Mahale S, Hosur MV, Biochem J. 2005 Jul 15;389(Pt 2):365-71. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15794743 15794743]
+Rapid screening for HIV-1 protease inhibitor leads through X-ray diffraction., Pillai B, Kannan KK, Bhat SV, Hosur MV, Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):594-6. Epub 2004, Feb 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14993705 14993705]
+Crystal structure of HIV-1 protease in situ product complex and observation of a low-barrier hydrogen bond between catalytic aspartates., Das A, Prashar V, Mahale S, Serre L, Ferrer JL, Hosur MV, Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18464-9. Epub 2006 Nov 20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17116869 17116869]
+[[Category: HIV-1 retropepsin]]
+[[Category: Protein complex]]
+[[Category: Bihani, S.]]
+[[Category: Das, A.]]
+[[Category: Ferrer, J L.]]
+[[Category: Hosur, M V.]]
+[[Category: Prashar, V.]]
+[[Category: Aid]]
+[[Category: Aspartyl protease]]
+[[Category: Capsid maturation]]
+[[Category: Capsid protein]]
+[[Category: Catalysis]]
+[[Category: Cytoplasm]]
+[[Category: Dna integration]]
+[[Category: Dna recombination]]
+[[Category: Dna-directed dna polymerase]]
+[[Category: Endonuclease]]
+[[Category: Hiv-1 protease]]
+[[Category: Host-virus interaction]]
+[[Category: Hydrolase]]
+[[Category: Inhibitor]]
+[[Category: Lipoprotein]]
+[[Category: Magnesium]]
+[[Category: Metal-binding]]
+[[Category: Multifunctional enzyme]]
+[[Category: Myristate]]
+[[Category: Nuclease]]
+[[Category: Nucleotidyltransferase]]
+[[Category: Nucleus]]
+[[Category: Phosphoprotein]]
+[[Category: Protease]]
+[[Category: Reaction intermediate]]
+[[Category: Ribosomal frameshifting]]
+[[Category: Rna-binding]]
+[[Category: Rna-directed dna polymerase]]
+[[Category: Transferase]]
+[[Category: Transition state]]
+[[Category: Viral nucleoprotein]]
+[[Category: Virion]]
+[[Category: X-ray crystallography]]
+[[Category: Zinc]]
+[[Category: Zinc-finger]]
+''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 10 10:33:05 2008''