Proteopedia:Problems: Difference between revisions
Eran Hodis (talk | contribs) No edit summary |
Eran Hodis (talk | contribs) |
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'''Scene tags placed in a bulleted list''' don't display as green links. [[User:Emartz|Emartz]] 17:36, 28 February 2008 (IST) | '''Scene tags placed in a bulleted list''' don't display as green links. [[User:Emartz|Emartz]] 17:36, 28 February 2008 (IST) | ||
<u><i>Workaround</i></u>: Use standard bullet list HTML notation instead of wikitext markup [[User:J Prilusky|J Prilusky]] 9:11 3 March 2008 | <u><i>Workaround</i></u>: Use standard bullet list HTML notation instead of wikitext markup [[User:J Prilusky|J Prilusky]] 9:11 3 March 2008 | ||
'''Scenes that have green displayed text that includes non-alphabetical characters like ampersands and greek letters''' do not display properly --[[User:Eran Hodis|Eran Hodis]] 17:24, 12 June 2008 (IDT) | |||
'''Models with >100,000 atoms''' fail to display due to java memory limitations. These are <0.1% of the PDB. I suggest that a box be inserted automatically (from a template) on such pages that explains why Jmol remains blank. We should test whether increasing the memory allocated to java reduces this problem, and if so, provide an explanation of how to increase java memory in Win and OS X. See also [http://bioportal.weizmann.ac.il/oca-docs/fgij/bigpdb.htm tests with big PDB files] and a [http://bip.weizmann.ac.il/oca-docs/PDBRecNamStats/PDBSizeDistribution.html list of the largest files in the PDB]. [[User:Eric Martz|Eric Martz]] 19:20, 13 April 2008 (IDT) | '''Models with >100,000 atoms''' fail to display due to java memory limitations. These are <0.1% of the PDB. I suggest that a box be inserted automatically (from a template) on such pages that explains why Jmol remains blank. We should test whether increasing the memory allocated to java reduces this problem, and if so, provide an explanation of how to increase java memory in Win and OS X. See also [http://bioportal.weizmann.ac.il/oca-docs/fgij/bigpdb.htm tests with big PDB files] and a [http://bip.weizmann.ac.il/oca-docs/PDBRecNamStats/PDBSizeDistribution.html list of the largest files in the PDB]. [[User:Eric Martz|Eric Martz]] 19:20, 13 April 2008 (IDT) | ||