9bde: Difference between revisions

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'''Unreleased structure'''


The entry 9bde is ON HOLD until Paper Publication
==Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor==
 
<StructureSection load='9bde' size='340' side='right'caption='[[9bde]], [[Resolution|resolution]] 4.18&Aring;' scene=''>
Authors:  
== Structural highlights ==
 
<table><tr><td colspan='2'>[[9bde]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelus_bactrianus Camelus bactrianus], [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus], [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] and [https://en.wikipedia.org/wiki/Streptococcus_sp._'group_G' Streptococcus sp. 'group G']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9BDE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9BDE FirstGlance]. <br>
Description:  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.18&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9bde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9bde OCA], [https://pdbe.org/9bde PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9bde RCSB], [https://www.ebi.ac.uk/pdbsum/9bde PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9bde ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/APOB_HUMAN APOB_HUMAN] Homozygous familial hypercholesterolemia. The disease is caused by variants affecting the gene represented in this entry. Most cases of FHBL1 result from nonsense mutations in the APOB gene that lead to a premature stop codon, which generate prematurely truncated apo B protein products (PubMed:21981844).<ref>PMID:21981844</ref>  The disease is caused by variants affecting the gene represented in this entry. Defects in APOB associated with defects in other genes (polygenic) can contribute to hypocholesterolemia.
== Function ==
[https://www.uniprot.org/uniprot/APOB_HUMAN APOB_HUMAN] Apolipoprotein B is a major protein constituent of chylomicrons (apo B-48), LDL (apo B-100) and VLDL (apo B-100). Apo B-100 functions as a recognition signal for the cellular binding and internalization of LDL particles by the apoB/E receptor.
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Camelus bactrianus]]
[[Category: Escherichia coli]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Staphylococcus aureus]]
[[Category: Streptococcus sp. 'group G']]
[[Category: Dearborn AD]]
[[Category: Graziano G]]
[[Category: Kumar A]]
[[Category: Lei H]]
[[Category: Marcotrigiano J]]
[[Category: Neufeld EB]]
[[Category: Reimund M]]
[[Category: Remaley AT]]

Latest revision as of 12:30, 25 December 2024

Middle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein ReceptorMiddle Region of Apolipoprotein B 100 bound to Low Density Lipoprotein Receptor

Structural highlights

9bde is a 6 chain structure with sequence from Camelus bactrianus, Escherichia coli, Homo sapiens, Mus musculus, Staphylococcus aureus and Streptococcus sp. 'group G'. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 4.18Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Disease

APOB_HUMAN Homozygous familial hypercholesterolemia. The disease is caused by variants affecting the gene represented in this entry. Most cases of FHBL1 result from nonsense mutations in the APOB gene that lead to a premature stop codon, which generate prematurely truncated apo B protein products (PubMed:21981844).[1] The disease is caused by variants affecting the gene represented in this entry. Defects in APOB associated with defects in other genes (polygenic) can contribute to hypocholesterolemia.

Function

APOB_HUMAN Apolipoprotein B is a major protein constituent of chylomicrons (apo B-48), LDL (apo B-100) and VLDL (apo B-100). Apo B-100 functions as a recognition signal for the cellular binding and internalization of LDL particles by the apoB/E receptor.

References

  1. Gangloff A, Bergeron J, Couture P, Martins R, Hegele RA, Gagné C. A novel mutation of apolipoprotein B in a French Canadian family with homozygous hypobetalipoproteinemia. J Clin Lipidol. 2011 Sep-Oct;5(5):414-7. PMID:21981844 doi:10.1016/j.jacl.2011.06.014

9bde, resolution 4.18Å

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OCA