1pb3: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:1pb3.jpg|left|200px]]
{{Seed}}
[[Image:1pb3.png|left|200px]]


<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1pb3|  PDB=1pb3  |  SCENE=  }}  
{{STRUCTURE_1pb3|  PDB=1pb3  |  SCENE=  }}  


'''Sites of binding and orientation in a four location model for protein stereospecificity.'''
===Sites of binding and orientation in a four location model for protein stereospecificity.===




==Overview==
<!--  
The stereospecificity of the enzyme isocitrate dehydrogenase was examined by steady-state kinetics and x-ray crystallography. The enzyme has the intriguing property that the apoenzyme in the absence of divalent metal showed a selectivity for the inactive l-enantiomer of the substrate isocitrate, whereas the enzyme containing magnesium showed selectivity for the physiologically active d-enantiomer. The hydrogen atom on the C2 carbon that is transferred during the reaction was, in both the d- and l-isocitrate complexes, in an orientation very close to that expected for delivery of a hydride ion to the cosubstrate NADP+. The beta-carboxylate that is eliminated as a CO2 molecule during the reaction occupied the same site on the protein in both the d- and l-isocitrate complexes. In addition, the C3 carbon was in the same protein site in both the d- and l-enantiomers. Only the fourth group, the OH atom, was in a very different position in the apo enzyme and in the metal-containing complexes. A four-location model is necessary to explain the enantiomeric specificity of IDH in contrast to the conventional three-point attachment model. The thermodynamic and kinetic ramifications of this model are explored.
The line below this paragraph, {{ABSTRACT_PUBMED_10902579}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 10902579 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_10902579}}


==About this Structure==
==About this Structure==
Line 27: Line 31:
[[Category: Isocitrate dehydrogense,idh]]
[[Category: Isocitrate dehydrogense,idh]]
[[Category: Stereospecificity]]
[[Category: Stereospecificity]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May  3 04:53:46 2008''
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:29:33 2008''

Revision as of 06:29, 29 July 2008

File:1pb3.png

Template:STRUCTURE 1pb3

Sites of binding and orientation in a four location model for protein stereospecificity.Sites of binding and orientation in a four location model for protein stereospecificity.

Template:ABSTRACT PUBMED 10902579

About this StructureAbout this Structure

1PB3 is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

ReferenceReference

Sites of binding and orientation in a four-location model for protein stereospecificity., Mesecar AD, Koshland DE Jr, IUBMB Life. 2000 May;49(5):457-66. PMID:10902579

Page seeded by OCA on Tue Jul 29 06:29:33 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA