4xda: Difference between revisions
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4xda]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O395 Vibrio cholerae O395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XDA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XDA FirstGlance]. <br> | <table><tr><td colspan='2'>[[4xda]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O395 Vibrio cholerae O395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XDA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XDA FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RIB:RIBOSE'>RIB</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RIB:RIBOSE'>RIB</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xda OCA], [https://pdbe.org/4xda PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xda RCSB], [https://www.ebi.ac.uk/pdbsum/4xda PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xda ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xda OCA], [https://pdbe.org/4xda PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xda RCSB], [https://www.ebi.ac.uk/pdbsum/4xda PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xda ProSAT]</span></td></tr> | ||
</table> | </table> | ||
Latest revision as of 12:02, 20 March 2024
Vibrio cholerae O395 Ribokinase complexed with Ribose, ADP and Sodium ion.Vibrio cholerae O395 Ribokinase complexed with Ribose, ADP and Sodium ion.
Structural highlights
FunctionA0A0H2UL04_VIBC3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.[HAMAP-Rule:MF_01987] See Also |
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