8iov: Difference between revisions

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'''Unreleased structure'''


The entry 8iov is ON HOLD  until Paper Publication
==Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2==
 
<StructureSection load='8iov' size='340' side='right'caption='[[8iov]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
Authors: Anraku, Y., Kita, S., Yajima, H., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[8iov]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Severe_acute_respiratory_syndrome_coronavirus_2 Severe acute respiratory syndrome coronavirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8IOV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8IOV FirstGlance]. <br>
Description: Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8iov FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8iov OCA], [https://pdbe.org/8iov PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8iov RCSB], [https://www.ebi.ac.uk/pdbsum/8iov PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8iov ProSAT]</span></td></tr>
[[Category: Hashiguchi, T]]
</table>
[[Category: Sasaki, J]]
== Function ==
[[Category: Anraku, Y]]
[https://www.uniprot.org/uniprot/ACE2_HUMAN ACE2_HUMAN] Carboxypeptidase which converts angiotensin I to angiotensin 1-9, a peptide of unknown function, and angiotensin II to angiotensin 1-7, a vasodilator. Also able to hydrolyze apelin-13 and dynorphin-13 with high efficiency. May be an important regulator of heart function. In case of human coronaviruses SARS and HCoV-NL63 infections, serve as functional receptor for the spike glycoprotein of both coronaviruses.<ref>PMID:10969042</ref> <ref>PMID:10924499</ref> <ref>PMID:14647384</ref>
[[Category: Yajima, H]]
== References ==
[[Category: Sasaki-Tabata, K]]
<references/>
[[Category: Kita, S]]
__TOC__
[[Category: Maenaka, K]]
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Severe acute respiratory syndrome coronavirus 2]]
[[Category: Anraku Y]]
[[Category: Hashiguchi T]]
[[Category: Kita S]]
[[Category: Maenaka K]]
[[Category: Sasaki J]]
[[Category: Sasaki-Tabata K]]
[[Category: Yajima H]]

Revision as of 07:08, 25 May 2023

Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2

Structural highlights

8iov is a 2 chain structure with sequence from Homo sapiens and Severe acute respiratory syndrome coronavirus 2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ACE2_HUMAN Carboxypeptidase which converts angiotensin I to angiotensin 1-9, a peptide of unknown function, and angiotensin II to angiotensin 1-7, a vasodilator. Also able to hydrolyze apelin-13 and dynorphin-13 with high efficiency. May be an important regulator of heart function. In case of human coronaviruses SARS and HCoV-NL63 infections, serve as functional receptor for the spike glycoprotein of both coronaviruses.[1] [2] [3]

References

  1. ↑ Donoghue M, Hsieh F, Baronas E, Godbout K, Gosselin M, Stagliano N, Donovan M, Woolf B, Robison K, Jeyaseelan R, Breitbart RE, Acton S. A novel angiotensin-converting enzyme-related carboxypeptidase (ACE2) converts angiotensin I to angiotensin 1-9. Circ Res. 2000 Sep 1;87(5):E1-9. PMID:10969042
  2. ↑ Tipnis SR, Hooper NM, Hyde R, Karran E, Christie G, Turner AJ. A human homolog of angiotensin-converting enzyme. Cloning and functional expression as a captopril-insensitive carboxypeptidase. J Biol Chem. 2000 Oct 27;275(43):33238-43. PMID:10924499 doi:http://dx.doi.org/10.1074/jbc.M002615200
  3. ↑ Li W, Moore MJ, Vasilieva N, Sui J, Wong SK, Berne MA, Somasundaran M, Sullivan JL, Luzuriaga K, Greenough TC, Choe H, Farzan M. Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus. Nature. 2003 Nov 27;426(6965):450-4. PMID:14647384 doi:http://dx.doi.org/10.1038/nature02145

8iov, resolution 3.29Å

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OCA
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