Biological Unit: Showing: Difference between revisions
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Occasional PDB files specify more than one biological unit. The easiest way to see all the biological units is to use FirstGlance in Jmol: see [[Biological_Unit#Visualizing_the_Biological_Unit|Visualizing the Biological Unit]]. | Occasional PDB files specify more than one biological unit. The easiest way to see all the biological units is to use FirstGlance in Jmol: see [[Biological_Unit#Visualizing_the_Biological_Unit|Visualizing the Biological Unit]]. | ||
If you want to show biological unit 2 (or a higher number) in a green link scene in Proteopedia, use the FILTER option in the ''Load Molecule'' dialog of the [[Scene Authoring Tools]]. To get biomolecule 2, simply enter '''biomolecule 2''' in the FILTER slot. This will load all atoms in biomolecule 2. | If you want to show biological unit 2 (or a higher number) in a green link scene in Proteopedia, use the FILTER option in the ''Load Molecule'' dialog of the [[Scene Authoring Tools]]. To get biomolecule 2, simply enter '''biomolecule 2''' in the FILTER slot. This will load all atoms in biomolecule 2. | ||
[[Image:SAT-filter1.png]] | |||
===Simplification=== | ===Simplification=== | ||
Sometimes there are too many atoms for good performance of JSmol, and in such cases, simplifying to show only the alpha carbons (or sometimes a subset of alpha carbons) is usually sufficient. | |||
...UNDER CONSTRUCTION |