8b6c: Difference between revisions

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'''Unreleased structure'''


The entry 8b6c is ON HOLD
==Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147==
 
<StructureSection load='8b6c' size='340' side='right'caption='[[8b6c]], [[Resolution|resolution]] 2.79&Aring;' scene=''>
Authors: Pauwels, E., Shewakramani, N.R., De Wijngaert, B., Vermeire, K., Das, K.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[8b6c]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8B6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8B6C FirstGlance]. <br>
Description: Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MA:6-HYDRO-1-METHYLADENOSINE-5-MONOPHOSPHATE'>1MA</scene>, <scene name='pdbligand=5MC:5-METHYLCYTIDINE-5-MONOPHOSPHATE'>5MC</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=A2M:2-O-METHYLADENOSINE+5-(DIHYDROGEN+PHOSPHATE)'>A2M</scene>, <scene name='pdbligand=B8H:[(2~{R},3~{S},4~{R},5~{S})-5-[1-methyl-2,4-bis(oxidanylidene)pyrimidin-5-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl+dihydrogen+phosphate'>B8H</scene>, <scene name='pdbligand=B8K:7-acetyl,+guanosine-5-monophosphate'>B8K</scene>, <scene name='pdbligand=BGH:[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-ethanoyl-6-oxidanylidene-1,8-dihydropurin-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl+dihydrogen+phosphate'>BGH</scene>, <scene name='pdbligand=E6G:6-ethyl,+guanosine-5-monophosphate'>E6G</scene>, <scene name='pdbligand=E7G:7-ethyl,+guanosine-5-monophosphate'>E7G</scene>, <scene name='pdbligand=I4U:4-isopropyl,+uridine-5-monophosphate'>I4U</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=OMC:O2-METHYLYCYTIDINE-5-MONOPHOSPHATE'>OMC</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=OMU:O2-METHYLURIDINE+5-MONOPHOSPHATE'>OMU</scene>, <scene name='pdbligand=OWI:4-[[9-(cyclohexylmethyl)-3-methylidene-5-(4-methylphenyl)sulfonyl-1,5,9-triazacyclododec-1-yl]sulfonyl]-~{N},~{N}-dimethyl-aniline'>OWI</scene>, <scene name='pdbligand=P4U:4-propyl,+uridine-5-monophosphate'>P4U</scene>, <scene name='pdbligand=P7G:7-propyl,+guanosine-5-monophosphate'>P7G</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=UR3:3-METHYLURIDINE-5-MONOPHOSHATE'>UR3</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[Category: Unreleased Structures]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8b6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8b6c OCA], [https://pdbe.org/8b6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8b6c RCSB], [https://www.ebi.ac.uk/pdbsum/8b6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8b6c ProSAT]</span></td></tr>
[[Category: De Wijngaert, B]]
</table>
[[Category: Das, K]]
== Function ==
[[Category: Shewakramani, N.R]]
[https://www.uniprot.org/uniprot/G1SHQ2_RABIT G1SHQ2_RABIT]
[[Category: Vermeire, K]]
__TOC__
[[Category: Pauwels, E]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Das K]]
[[Category: De Wijngaert B]]
[[Category: Pauwels E]]
[[Category: Shewakramani NR]]
[[Category: Vermeire K]]

Latest revision as of 15:40, 22 February 2023

Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative CK147

Structural highlights

8b6c is a 10 chain structure with sequence from Oryctolagus cuniculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , , , , , , , , , , , , , , , , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

G1SHQ2_RABIT

8b6c, resolution 2.79Å

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OCA
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