AlphaFold pLDDT and expected distance error: Difference between revisions
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==Expected distance error== | ==Expected distance error== | ||
Alphafold also predicts the expected error in the distance of two residues. Thus, this is a 2-dimensional (pairwise) data set. The plot of the data is shown | Alphafold also predicts the expected error in the distance of two residues. Thus, this is a 2-dimensional (pairwise) data set. The plot of the data is shown below. On the right, you can see the <scene name='92/920232/Two_dimensional/1'>expected error in the distance between residue 1000</scene> mapped by color on the second residue. It becomes apparent that the distance between residue 1000 and residues in the N-terminal part of the protein are ill-defined. However, if you show the expected errors to residue 400 (by using the radio buttons below), the N-terminal domain is well-defined in isolation. It is the relative domain orientation that is not well predicted. | ||
Residue <jmol> | |||
<jmolRadioGroup> | |||
<item> | |||
<script>{*.ca}.property_t = [11, 8, 5, 5, 5, 5, 5, 4, 4, 4, 5, 4, 4, 4, 5, 5, 4, 4, 4, 5, 5, 5, 5, 6, 6, 5, 6, 6, 6, 6, 6, 6, 6, 6, 7, 6, 6, 6, 6, 7, 6, 6, 6, 6, 6, 6, 6, 6, 5, 6, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 5, 6, 6, 5, 5, 6, 5, 5, 5, 6, 5, 5, 6, 6, 5, 5, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 3, 3, 3, 4, 4, 4, 4, 5, 4, 5, 4, 4, 4, 4, 4, 4, 4, 4, 4, 4, 5, 4, 4, 5, 5, 5, 5, 5, 5, 5, 6, 6, 6, 6, 6, 6, 6, 6, 6, 5, 4, 4, 4, 4, 4, 4, 3, 3, 3, 3, 3, 3, 3, 2, 2, 3, 3, 3, 3, 4, 3, 3, 3, 2, 2, 2, 3, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 4, 3, 4, 4, 4, 4, 4, 5, 4, 4, 4, 4, 3, 3, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 3, 2, 2, 3, 3, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 3, 3, 3, 3, 3, 3, 3, 3, 3, 4, 5, 5, 4, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 4, 5, 4, 4, 4, 5, 4, 4, 4, 4, 3, 4, 4, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 5, 5, 6, 6, 7, 7, 7, 6, 6, 6, 6, 6, 6, 6, 6, 6, 5, 5, 5, 5, 5, 5, 5, 4, 5, 5, 5, 4, 4, 4, 4, 4, 4, 4, 4, 5, 5, 5, 5, 5, 6, 6, 6, 5, 5, 6, 5, 5, 5, 6, 5, 5, 5, 5, 5, 4, 4, 4, 4, 4, 3, 3, 3, 2, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 1, 1, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 1, 1, 2, 2, 1, 2, 2, 2, 2, 1, 1, 1, 1, 1, 0, 1, 1, 1, 2, 2, 2, 2, 2, 1, 1, 2, 1, 1, 1, 2, 1, 1, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 2, 2, 1, 1, 2, 2, 1, 2, 2, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 2, 2, 3, 3, 2, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 4, 4, 5, 4, 5, 4, 4, 4, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 4, 4, 4, 4, 4, 4, 4, 4, 3, 3, 3, 3, 2, 3, 3, 3, 2, 3, 3, 2, 2, 3, 3, 2, 2, 2, 2, 1, 1, 1, 2, 2, 3, 3, 4, 4, 3, 4, 4, 4, 4, 5, 5, 5, 4, 4, 4, 4, 4, 4, 4, 4, 3, 4, 4, 5, 5, 5, 5, 5, 5, 5, 5, 4, 5, 6, 5, 5, 5, 6, 6, 6, 8, 10, 13, 14, 17, 19, 22, 19, 21, 23, 23, 23, 25, 25, 27, 26, 25, 26, 26, 27, 27, 24, 25, 24, 25, 23, 24, 23, 23, 21, 21, 23, 25, 26, 26, 24, 27, 27, 26, 26, 26, 27, 27, 28, 27, 26, 28, 28, 28, 28, 28, 28, 26, 27, 26, 26, 26, 24, 27, 25, 27, 25, 25, 25, 23, 24, 23, 23, 23, 24, 21, 22, 21, 22, 21, 22, 21, 22, 24, 21, 22, 25, 25, 23, 25, 25, 24, 25, 26, 27, 27, 27, 27, 28, 27, 28, 28, 28, 28, 29, 28, 28, 28, 28, 28, 28, 28, 28, 28, 28, 28, 27, 27, 27, 28, 27, 28, 27, 28, 27, 27, 24, 26, 26, 24, 24, 27, 27, 26, 26, 27, 27, 26, 27, 27, 28, 28, 28, 28, 27, 28, 28, 28, 27, 28, 26, 29, 28, 27, 28, 28, 27, 28, 29, 28, 28, 28, 27, 29, 28, 28, 27, 27, 26, 26, 27, 26, 26, 28, 26, 28, 27, 28, 27, 27, 27, 27, 27, 28, 28, 28, 29, 28, 28, 28, 27, 29, 28, 28, 28, 27, 27, 25, 26, 26, 26, 26, 26, 26, 25, 27, 27, 27, 28, 28, 25, 26, 28, 28, 27, 28, 28, 28, 28, 27, 27, 27, 26, 25, 24, 26, 27, 25, 26, 27, 27, 27, 28, 28, 28, 28, 29, 29, 27, 28, 28, 28, 27, 27, 28, 28, 27, 26, 27, 27, 27, 26, 26, 26, 25, 27, 27, 27, 27, 27, 26, 27, 27, 27, 25, 27, 27, 27, 28, 28, 27, 29, 27, 28, 28, 28, 27, 28, 28, 29, 27, 29, 28, 30, 29, 29, 29, 29, 28, 29, 29, 29, 29, 29, 29, 28, 29, 29, 29, 30, 29, 29, 28, 29, 29, 29, 28, 28, 28, 28, 27, 26, 27, 25, 25, 25, 25, 24, 24, 25, 24, 24, 26, 25, 25, 25, 25, 26, 25, 24, 24, 23, 22, 22, 22, 24, 25, 24, 24, 25, 25, 25, 27, 26, 27, 26, 26, 28, 27, 28, 28, 28, 29, 29, 29, 28, 29, 29, 29, 29, 29, 28, 29, 29, 29, 29, 30, 29, 28, 29, 28, 29, 28, 28, 27, 28, 29, 28, 29, 29, 28, 29, 29, 28, 29, 28, 28, 29, 29, 29, 29, 28, 29, 27, 27, 28, 28, 28, 27, 27, 27, 27, 28, 27, 29, 28, 27, 28, 28, 28, 29, 29, 29, 29, 29, 29, 29, 29, 28, 29, 29, 29, 29, 28, 28, 28, 28, 29, 28, 28, 28, 29, 29, 29, 27, 28, 29, 29, 28, 27, 28, 28, 28, 27, 28, 27, 27, 27, 27, 27, 27, 26, 27, 27, 25, 26, 28, 26, 25, 26, 28, 26, 26, 28, 28, 26, 28, 29, 28, 27, 29, 29, 28, 29, 29, 30, 29, 29, 29, 29, 29, 29, 29, 29, 28, 29, 29, 27, 27, 29, 27, 26, 27, 26, 28, 28, 28, 28, 27, 26, 27, 25, 27, 27, 26, 26, 28, 27, 26, 28, 27, 28, 28, 27, 28, 29, 29, 29, 28, 29, 29, 28, 29, 29, 28, 29, 29, 29, 29, 28, 29, 29, 28, 28, 28, 28, 28, 29, 28, 27, 26, 27, 26, 27, 27, 28, 29, 28, 29, 28, 29, 28, 27, 27, 26, 28, 26, 27, 27, 27, 28, 29, 28, 28, 28, 29, 28, 29, 29, 29, 28, 29, 29, 28, 29, 29, 30, 29, 29, 29, 29, 28, 28, 28, 28, 27, 29, 28, 28, 28, 27, 28, 27] | |||
select alpha; color property_t; spacefill off; label off | |||
set hoverlabel "residue %r vs 400: %[property_t] Å" | |||
select 400 and alpha; spacefill on; color yellow | |||
</script> | |||
<text>400</text> | |||
<checked>false</checked> | |||
</item> | |||
<item> | |||
<script>{*.ca}.property_t = [20, 18, 17, 18, 16, 17, 19, 18, 17, 18, 18, 17, 17, 18, 18, 20, 18, 19, 17, 18, 18, 20, 20, 20, 21, 20, 19, 21, 20, 20, 20, 19, 20, 20, 20, 20, 21, 20, 21, 21, 21, 19, 20, 20, 18, 20, 20, 20, 18, 18, 19, 18, 20, 18, 19, 19, 19, 19, 21, 21, 19, 19, 21, 20, 19, 20, 19, 20, 20, 20, 19, 19, 19, 21, 18, 19, 18, 18, 18, 17, 18, 19, 18, 17, 17, 17, 18, 18, 17, 18, 18, 17, 19, 18, 17, 19, 17, 18, 18, 18, 18, 18, 18, 19, 18, 19, 19, 20, 19, 19, 20, 20, 20, 20, 21, 19, 20, 22, 21, 20, 21, 22, 20, 20, 21, 19, 20, 18, 20, 17, 17, 18, 15, 16, 16, 16, 17, 15, 13, 11, 10, 12, 12, 14, 15, 17, 16, 13, 12, 11, 13, 14, 14, 15, 13, 13, 13, 15, 15, 14, 14, 16, 15, 15, 17, 17, 18, 17, 18, 17, 19, 17, 18, 16, 18, 18, 16, 15, 15, 15, 16, 16, 14, 13, 11, 10, 10, 13, 13, 11, 13, 14, 14, 13, 15, 16, 14, 14, 16, 16, 14, 17, 17, 15, 18, 16, 17, 16, 15, 16, 14, 14, 13, 15, 13, 15, 15, 16, 13, 12, 12, 12, 12, 10, 11, 9, 10, 13, 11, 9, 10, 10, 10, 9, 12, 11, 11, 13, 12, 14, 15, 15, 15, 15, 13, 15, 14, 17, 15, 17, 17, 18, 16, 17, 17, 14, 13, 15, 14, 12, 13, 15, 13, 11, 13, 12, 15, 15, 16, 14, 17, 16, 18, 19, 19, 18, 18, 19, 19, 21, 20, 19, 18, 19, 20, 20, 18, 18, 19, 20, 19, 18, 19, 20, 18, 17, 19, 18, 17, 17, 18, 17, 17, 16, 16, 17, 18, 17, 18, 16, 17, 19, 20, 20, 20, 19, 20, 21, 20, 20, 19, 20, 19, 21, 18, 17, 18, 18, 18, 19, 19, 16, 15, 16, 13, 13, 12, 11, 11, 9, 10, 7, 8, 8, 9, 9, 9, 8, 9, 8, 10, 10, 9, 8, 7, 6, 6, 4, 4, 3, 4, 5, 5, 6, 8, 7, 7, 7, 8, 8, 7, 8, 11, 10, 10, 10, 10, 10, 9, 9, 8, 10, 8, 8, 8, 6, 6, 6, 7, 5, 6, 6, 6, 4, 4, 6, 6, 5, 5, 6, 6, 9, 8, 9, 11, 12, 11, 11, 10, 11, 12, 10, 10, 11, 11, 8, 7, 10, 9, 8, 9, 10, 10, 9, 7, 7, 8, 8, 7, 9, 7, 6, 6, 5, 9, 10, 10, 11, 10, 10, 9, 11, 11, 10, 9, 11, 9, 7, 8, 9, 9, 7, 7, 8, 5, 9, 10, 10, 11, 12, 11, 13, 13, 13, 13, 12, 13, 12, 12, 11, 13, 11, 11, 12, 11, 11, 10, 9, 9, 9, 6, 10, 9, 11, 11, 11, 13, 12, 12, 11, 11, 11, 12, 12, 12, 13, 10, 12, 12, 12, 11, 12, 13, 12, 13, 12, 13, 12, 15, 14, 13, 13, 13, 12, 12, 11, 11, 9, 9, 7, 8, 5, 8, 9, 6, 9, 8, 9, 9, 10, 12, 11, 12, 12, 12, 11, 12, 10, 8, 10, 11, 8, 9, 11, 10, 8, 11, 11, 11, 11, 12, 12, 11, 11, 12, 9, 8, 7, 6, 5, 5, 5, 6, 6, 6, 7, 8, 8, 8, 8, 8, 7, 8, 6, 7, 8, 4, 5, 6, 6, 5, 6, 6, 6, 6, 8, 7, 6, 7, 9, 7, 7, 7, 5, 5, 4, 3, 2, 1, 0, 1, 3, 4, 4, 7, 7, 6, 5, 6, 8, 10, 7, 6, 10, 8, 6, 9, 11, 8, 8, 10, 12, 13, 13, 10, 11, 11, 11, 11, 11, 9, 9, 10, 7, 8, 9, 8, 7, 8, 10, 12, 15, 14, 17, 18, 19, 19, 19, 21, 21, 21, 23, 23, 23, 26, 25, 23, 25, 27, 26, 22, 25, 25, 23, 22, 23, 23, 21, 21, 21, 22, 23, 24, 25, 25, 27, 27, 25, 27, 26, 27, 26, 29, 28, 27, 28, 29, 29, 29, 29, 27, 28, 27, 26, 27, 25, 26, 26, 23, 24, 26, 24, 24, 24, 24, 23, 23, 23, 22, 20, 22, 20, 23, 23, 24, 23, 22, 23, 21, 22, 23, 24, 24, 23, 27, 26, 25, 26, 27, 27, 27, 28, 28, 28, 29, 29, 29, 29, 29, 30, 30, 29, 29, 29, 29, 28, 29, 29, 28, 29, 27, 28, 28, 28, 28, 29, 29, 29, 28, 27, 27, 27, 26, 26, 26, 26, 26, 26, 25, 27, 27, 25, 26, 28, 27, 28, 27, 29, 27, 28, 29, 28, 30, 29, 28, 29, 29, 29, 28, 29, 30, 29, 28, 30, 30, 29, 30, 29, 29, 29, 28, 27, 28, 27, 28, 28, 28, 28, 28, 28, 28, 28, 28, 28, 28, 29, 28, 28, 29, 29, 29, 29, 30, 29, 29, 29, 30, 29, 28, 28, 27, 28, 27, 28, 27, 28, 28, 26, 28, 27, 27, 27, 28, 28, 28, 28, 28, 29, 29, 29, 29, 29, 28, 28, 27, 27, 27, 25, 26, 26, 25, 25, 27, 26, 26, 27, 27, 27, 28, 28, 29, 28, 29, 28, 28, 29, 29, 28, 28, 29, 29, 28, 27, 29, 29, 27, 28, 28, 28, 26, 28, 29, 27, 28, 28, 29, 28, 29, 27, 28, 28, 29, 29, 29, 29, 29, 30, 29, 28, 30, 29, 29, 29, 28, 29, 29, 29, 30, 30, 30, 29, 30, 29, 29, 30, 29, 30, 30, 30, 30, 30, 30, 30, 29, 30, 29, 29, 28, 29, 29, 29, 27, 28, 28, 26, 26, 26, 25, 26, 25, 26, 26, 26, 26, 24, 25, 26, 27, 27, 26, 26, 27, 26, 26, 25, 22, 22, 19, 22, 24, 24, 24, 24, 26, 25, 25, 26, 26, 25, 26, 26, 27, 27, 26, 28, 28, 28, 28, 29, 29, 29, 29, 28, 29, 28, 30, 29, 29, 29, 29, 29, 30, 30, 29, 29, 29, 30, 29, 27, 29, 29, 30, 29, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 28, 29, 28, 28, 29, 27, 29, 27, 28, 27, 28, 29, 26, 28, 28, 26, 29, 28, 29, 28, 28, 29, 30, 30, 30, 30, 29, 30, 29, 30, 30, 30, 29, 29, 29, 28, 29, 28, 29, 28, 29, 29, 29, 27, 28, 29, 28, 27, 28, 29, 27, 27, 29, 29, 28, 27, 25, 25, 27, 27, 25, 26, 27, 26, 24, 26, 27, 25, 26, 27, 27, 26, 28, 27, 27, 26, 28, 28, 28, 28, 30, 29, 29, 29, 30, 30, 30, 30, 30, 29, 30, 30, 28, 29, 29, 28, 27, 28, 28, 28, 27, 27, 26, 27, 28, 29, 29, 27, 28, 27, 27, 28, 27, 28, 26, 27, 28, 27, 28, 26, 29, 28, 28, 29, 29, 28, 29, 30, 30, 29, 29, 29, 30, 30, 29, 29, 29, 29, 29, 29, 29, 29, 27, 28, 28, 28, 28, 28, 26, 27, 28, 26, 28, 28, 29, 28, 29, 29, 29, 28, 27, 28, 25, 27, 27, 25, 28, 25, 28, 29, 29, 30, 30, 29, 29, 30, 29, 29, 30, 30, 30, 29, 30, 30, 30, 30, 30, 30, 29, 29, 29, 29, 28, 28, 26, 27, 29, 28, 30, 29, 29, 30] | |||
select alpha; color property_t; spacefill off; label off | |||
set hoverlabel "residue %r vs 600: %[property_t] Å" | |||
select 600 and alpha; spacefill on; color yellow | |||
</script> | |||
<text>600</text> | |||
<checked>false</checked> | |||
</item> | |||
<item> | |||
<script>{*.ca}.property_t = [29, 30, 29, 30, 29, 30, 30, 29, 30, 30, 29, 29, 30, 30, 29, 29, 29, 29, 28, 28, 29, 28, 29, 28, 28, 29, 29, 28, 29, 30, 29, 30, 29, 29, 29, 30, 29, 30, 30, 30, 30, 30, 30, 29, 30, 29, 28, 27, 29, 28, 27, 28, 28, 29, 30, 30, 29, 30, 30, 30, 30, 30, 30, 30, 30, 30, 29, 29, 30, 30, 29, 30, 30, 29, 29, 29, 29, 29, 29, 28, 29, 29, 28, 28, 28, 29, 28, 30, 28, 28, 29, 28, 27, 28, 28, 30, 29, 30, 30, 29, 30, 30, 30, 29, 30, 30, 29, 29, 30, 30, 29, 30, 30, 30, 30, 30, 30, 30, 30, 29, 30, 29, 30, 30, 29, 29, 29, 29, 29, 29, 29, 28, 28, 28, 26, 28, 27, 27, 27, 27, 25, 26, 27, 28, 29, 27, 28, 28, 27, 28, 28, 28, 28, 29, 28, 28, 29, 29, 29, 29, 29, 29, 29, 30, 30, 29, 29, 30, 30, 29, 30, 30, 30, 29, 29, 29, 29, 28, 28, 27, 27, 25, 25, 26, 26, 25, 27, 28, 28, 28, 28, 28, 28, 28, 29, 29, 29, 30, 30, 29, 30, 30, 30, 29, 30, 30, 30, 29, 28, 28, 27, 27, 26, 26, 24, 26, 26, 23, 24, 24, 22, 24, 27, 26, 24, 24, 22, 25, 27, 26, 26, 28, 27, 27, 28, 29, 28, 27, 28, 28, 29, 29, 28, 28, 25, 26, 25, 25, 23, 27, 26, 22, 23, 25, 24, 22, 24, 26, 24, 23, 27, 28, 26, 28, 28, 30, 29, 29, 27, 28, 27, 27, 27, 25, 27, 27, 24, 26, 25, 25, 26, 26, 26, 27, 27, 26, 28, 29, 28, 26, 27, 28, 27, 26, 27, 29, 26, 28, 29, 29, 26, 29, 27, 29, 29, 29, 28, 28, 28, 25, 26, 28, 27, 28, 29, 29, 28, 28, 29, 29, 28, 29, 29, 29, 29, 29, 29, 29, 29, 30, 29, 30, 29, 29, 29, 28, 29, 30, 29, 28, 28, 27, 26, 25, 24, 23, 26, 25, 26, 28, 28, 29, 27, 26, 26, 29, 26, 26, 27, 27, 28, 27, 27, 27, 29, 28, 29, 28, 29, 28, 28, 28, 29, 28, 28, 29, 29, 28, 28, 27, 25, 28, 27, 26, 27, 26, 26, 24, 26, 26, 25, 24, 25, 26, 26, 24, 26, 26, 26, 27, 28, 29, 28, 29, 28, 28, 29, 28, 30, 29, 29, 29, 28, 28, 28, 27, 27, 27, 27, 26, 24, 26, 26, 24, 24, 25, 25, 22, 25, 26, 26, 27, 27, 28, 29, 29, 29, 30, 30, 29, 29, 29, 29, 28, 28, 28, 27, 26, 26, 27, 26, 27, 27, 28, 27, 29, 29, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 29, 29, 29, 29, 28, 28, 27, 28, 28, 29, 28, 29, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 29, 30, 30, 30, 29, 30, 30, 30, 29, 30, 30, 29, 30, 30, 30, 29, 29, 29, 29, 30, 29, 28, 29, 28, 30, 28, 29, 29, 29, 30, 30, 30, 30, 30, 30, 30, 30, 30, 30, 29, 30, 30, 29, 30, 30, 29, 30, 29, 30, 29, 30, 30, 29, 29, 30, 30, 29, 30, 29, 29, 28, 29, 28, 29, 28, 28, 28, 29, 30, 28, 29, 29, 30, 29, 29, 28, 27, 27, 29, 27, 26, 28, 29, 26, 26, 29, 29, 27, 27, 30, 28, 27, 29, 29, 29, 29, 28, 27, 28, 27, 28, 26, 25, 25, 27, 26, 27, 23, 27, 26, 25, 27, 28, 27, 29, 28, 28, 28, 29, 28, 29, 29, 29, 29, 30, 29, 30, 30, 29, 29, 30, 29, 29, 30, 29, 29, 29, 29, 28, 28, 28, 28, 28, 27, 26, 25, 23, 24, 22, 20, 18, 18, 18, 17, 16, 16, 15, 17, 14, 14, 15, 14, 13, 12, 14, 12, 11, 10, 11, 11, 9, 9, 10, 12, 11, 12, 13, 13, 13, 12, 13, 12, 13, 13, 14, 14, 12, 12, 13, 12, 13, 11, 12, 10, 11, 12, 10, 9, 12, 10, 9, 10, 9, 10, 9, 9, 9, 9, 10, 10, 9, 10, 12, 10, 10, 11, 10, 8, 9, 8, 8, 8, 7, 8, 8, 8, 8, 9, 7, 8, 9, 9, 10, 9, 10, 10, 11, 11, 12, 10, 11, 12, 11, 11, 7, 5, 4, 3, 2, 2, 2, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 1, 2, 2, 1, 1, 1, 1, 0, 1, 1, 1, 2, 2, 3, 3, 3, 3, 2, 2, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 2, 3, 2, 2, 1, 2, 1, 1, 1, 2, 2, 3, 3, 2, 3, 3, 3, 3, 2, 3, 3, 3, 2, 3, 3, 2, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 2, 2, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 3, 3, 2, 3, 3, 2, 2, 3, 3, 3, 3, 4, 3, 3, 3, 4, 4, 3, 5, 5, 4, 5, 6, 7, 7, 8, 8, 9, 8, 9, 10, 9, 10, 11, 11, 11, 10, 11, 10, 10, 10, 10, 11, 11, 13, 13, 12, 11, 12, 11, 11, 11, 10, 10, 11, 11, 9, 9, 9, 9, 8, 8, 8, 8, 9, 9, 9, 8, 9, 9, 8, 8, 8, 9, 8, 7, 8, 7, 7, 7, 7, 8, 8, 8, 9, 9, 9, 9, 9, 10, 10, 10, 10, 9, 9, 9, 9, 9, 9, 9, 9, 9, 8, 8, 9, 8, 9, 8, 9, 10, 8, 9, 9, 9, 9, 10, 10, 8, 9, 8, 8, 8, 8, 8, 8, 8, 9, 9, 10, 10, 10, 10, 10, 10, 10, 9, 8, 9, 10, 10, 10, 10, 11, 12, 12, 11, 12, 10, 11, 10, 8, 9, 8, 8, 8, 8, 8, 9, 9, 9, 9, 10, 10, 11, 10, 10, 10, 9, 9, 9, 10, 10, 10, 11, 11, 11, 12, 12, 12, 12, 12, 11, 10, 9, 9, 9, 8, 8, 8, 7, 7, 8, 7, 7, 7, 7, 6, 7, 7, 7, 6, 7, 8, 7, 7, 7, 7, 7, 8, 6, 7, 7, 7, 7, 7, 7, 7, 6, 7, 6, 7, 8, 7, 7, 8, 8, 8, 8, 9, 9, 9, 10, 10, 10, 10, 10, 10, 10, 11, 10, 11, 11, 11, 11, 11, 11, 10, 11, 11, 10, 10, 9, 9, 9, 10, 10, 10, 10, 10, 9, 8, 7, 7, 7, 6, 7, 7, 7, 7, 6, 7, 6, 7, 7, 8, 7, 8, 8, 8, 9, 9, 9, 8, 8, 8, 8, 8, 8, 8, 8, 6, 6, 5, 6, 5, 6, 6, 7, 5, 6, 7, 7, 7, 7, 8, 8, 8, 8, 10, 10, 10, 10, 10, 10, 9, 9, 9, 8, 8, 7, 7, 8, 8, 9, 9, 9, 8, 10, 9, 8, 10, 9, 10, 9, 9, 10, 9, 9, 8, 8, 7, 7, 6, 6, 6, 7, 7, 8, 8, 9, 8, 8, 9, 9] | |||
select alpha; color property_t; spacefill off; label off | |||
set hoverlabel "residue %r vs 800: %[property_t] Å" | |||
select 800 and alpha; spacefill on; color yellow | |||
</script> | |||
<text>800</text> | |||
<checked>false</checked> | |||
</item> | |||
<item> | |||
<script>{*.ca}.property_t = [28, 28, 28, 28, 28, 28, 28, 29, 29, 28, 29, 29, 29, 29, 28, 28, 28, 29, 28, 28, 28, 28, 30, 28, 27, 29, 30, 27, 29, 29, 29, 29, 30, 29, 29, 29, 29, 29, 28, 29, 29, 29, 29, 29, 29, 30, 29, 29, 30, 28, 27, 29, 29, 28, 29, 29, 29, 29, 29, 29, 29, 29, 29, 30, 29, 29, 29, 29, 29, 29, 29, 29, 29, 28, 28, 29, 29, 28, 29, 28, 29, 29, 29, 27, 28, 29, 29, 29, 29, 29, 29, 29, 27, 29, 29, 29, 30, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 28, 29, 29, 29, 28, 29, 29, 28, 28, 28, 28, 28, 29, 29, 28, 28, 28, 28, 28, 26, 28, 27, 27, 27, 27, 26, 26, 27, 27, 27, 25, 27, 27, 27, 28, 27, 27, 28, 28, 29, 28, 29, 29, 27, 29, 29, 29, 28, 29, 29, 29, 29, 29, 28, 29, 29, 28, 28, 27, 29, 28, 28, 28, 28, 27, 28, 27, 25, 26, 26, 25, 25, 27, 26, 26, 28, 28, 28, 28, 28, 28, 28, 29, 29, 29, 29, 29, 28, 28, 28, 28, 28, 28, 28, 28, 26, 27, 25, 26, 24, 26, 25, 25, 26, 25, 25, 25, 25, 25, 25, 25, 27, 25, 26, 26, 25, 26, 27, 26, 26, 28, 28, 28, 27, 28, 28, 28, 26, 26, 27, 26, 25, 25, 24, 26, 25, 26, 26, 24, 25, 26, 23, 25, 27, 26, 26, 28, 27, 27, 28, 28, 29, 28, 27, 27, 26, 27, 27, 26, 27, 26, 25, 25, 27, 26, 27, 26, 26, 27, 26, 26, 28, 29, 29, 26, 27, 28, 28, 26, 27, 28, 27, 27, 28, 29, 27, 28, 27, 28, 29, 28, 27, 28, 28, 26, 26, 28, 29, 29, 30, 29, 28, 29, 29, 28, 28, 29, 29, 28, 29, 29, 29, 29, 29, 29, 28, 29, 29, 28, 28, 28, 28, 28, 28, 28, 27, 26, 25, 25, 25, 26, 25, 26, 27, 28, 29, 28, 27, 27, 28, 28, 27, 26, 28, 27, 28, 27, 28, 28, 29, 28, 28, 28, 29, 28, 28, 28, 29, 27, 28, 29, 29, 28, 27, 27, 26, 26, 26, 25, 25, 26, 24, 26, 26, 26, 24, 25, 26, 26, 26, 25, 26, 27, 28, 27, 28, 28, 29, 29, 28, 28, 29, 29, 29, 29, 28, 28, 28, 28, 28, 27, 26, 26, 26, 26, 23, 25, 26, 24, 25, 25, 23, 26, 24, 26, 27, 28, 27, 28, 29, 29, 29, 29, 29, 29, 29, 29, 27, 27, 28, 28, 26, 26, 26, 26, 26, 28, 27, 28, 28, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 29, 28, 28, 29, 29, 28, 28, 28, 28, 28, 28, 26, 28, 27, 28, 28, 28, 30, 29, 30, 29, 29, 28, 29, 30, 29, 29, 29, 28, 28, 29, 29, 28, 28, 29, 29, 28, 28, 29, 29, 28, 28, 29, 28, 28, 28, 28, 27, 29, 28, 28, 28, 27, 29, 29, 29, 29, 29, 29, 29, 29, 30, 29, 29, 29, 29, 28, 28, 29, 29, 29, 29, 29, 29, 29, 28, 29, 29, 28, 28, 29, 29, 28, 29, 28, 28, 28, 28, 28, 28, 28, 28, 29, 29, 28, 29, 28, 29, 29, 29, 29, 28, 29, 29, 29, 29, 28, 27, 27, 28, 28, 27, 28, 29, 28, 27, 29, 29, 27, 28, 29, 28, 27, 27, 28, 27, 28, 28, 27, 28, 29, 28, 28, 26, 26, 28, 26, 27, 26, 28, 28, 27, 28, 27, 28, 28, 28, 28, 28, 28, 29, 29, 28, 29, 29, 29, 28, 29, 28, 28, 28, 28, 29, 28, 28, 29, 29, 28, 28, 29, 28, 28, 27, 28, 27, 26, 25, 22, 24, 23, 21, 19, 20, 20, 18, 18, 16, 16, 16, 16, 15, 15, 14, 15, 15, 15, 14, 14, 14, 14, 13, 12, 13, 13, 15, 12, 14, 13, 13, 14, 13, 13, 14, 15, 14, 15, 16, 15, 16, 16, 17, 16, 16, 16, 15, 15, 16, 15, 16, 16, 15, 14, 14, 14, 14, 14, 13, 13, 13, 13, 13, 12, 13, 13, 12, 11, 11, 12, 10, 9, 10, 10, 10, 12, 10, 10, 10, 11, 12, 11, 10, 11, 12, 12, 13, 12, 14, 14, 14, 15, 16, 15, 15, 15, 15, 15, 12, 11, 10, 9, 9, 9, 8, 8, 7, 6, 6, 6, 6, 6, 6, 5, 5, 5, 5, 6, 8, 6, 5, 7, 7, 7, 7, 8, 7, 7, 8, 8, 8, 8, 8, 8, 7, 7, 7, 6, 7, 7, 7, 7, 8, 7, 8, 8, 8, 8, 8, 8, 9, 9, 8, 9, 9, 8, 7, 7, 7, 6, 5, 6, 6, 6, 5, 5, 5, 5, 6, 6, 6, 6, 8, 7, 7, 8, 8, 8, 9, 9, 9, 8, 9, 9, 8, 7, 7, 7, 6, 6, 7, 6, 5, 6, 6, 7, 7, 6, 6, 7, 6, 6, 7, 7, 8, 7, 8, 9, 9, 8, 7, 7, 7, 7, 6, 6, 7, 7, 8, 7, 8, 9, 9, 8, 8, 8, 8, 9, 9, 10, 10, 10, 9, 10, 9, 9, 9, 9, 8, 8, 8, 8, 8, 7, 8, 8, 8, 7, 8, 8, 6, 7, 7, 7, 6, 6, 6, 5, 5, 4, 4, 4, 4, 4, 4, 4, 3, 4, 4, 3, 3, 3, 3, 3, 2, 3, 3, 2, 2, 2, 2, 2, 1, 2, 2, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 3, 2, 2, 3, 3, 3, 3, 3, 4, 4, 3, 4, 5, 4, 5, 5, 4, 4, 4, 5, 5, 4, 5, 6, 6, 6, 5, 5, 5, 5, 4, 4, 4, 4, 4, 4, 4, 3, 3, 4, 3, 3, 3, 4, 3, 3, 3, 3, 3, 3, 3, 2, 2, 2, 1, 1, 1, 0, 1, 1, 1, 1, 2, 2, 2, 2, 3, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 4, 4, 4, 4, 5, 4, 4, 3, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 4, 4, 4, 4, 5, 4, 5, 4, 4, 4, 4, 4, 4, 3, 3, 3, 3, 3, 2, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 1, 2, 2, 1, 2, 2, 2, 1, 1, 2, 2, 2, 2, 3, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 2, 3, 3, 3, 3, 2, 2, 2, 2, 1, 2, 2, 1, 1, 1, 1, 2, 2, 1, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 2, 2, 2, 3, 2, 2, 2, 1, 1, 1, 1, 2, 1, 2, 2, 2, 2, 3, 3, 3, 3, 3, 4, 4, 4, 4, 4, 4, 3, 4, 4, 3, 3, 4, 3, 3, 3, 3, 3, 4, 4, 4, 4, 3, 4, 4, 4, 3, 4, 4, 4, 4, 5, 4, 5, 5, 5] | |||
select alpha; color property_t; spacefill off; label off | |||
set hoverlabel "residue %r vs 1000: %[property_t] Å" | |||
select 1000 and alpha; spacefill on; color yellow | |||
</script> | |||
<text>1000</text> | |||
<checked>true</checked> | |||
</item> | |||
</jmolRadioGroup> | |||
</jmol> | |||
[[Image:Position_error_alphafold_P13009.jpg|350px]] | [[Image:Position_error_alphafold_P13009.jpg|350px]] | ||