6t2a: Difference between revisions
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<StructureSection load='6t2a' size='340' side='right'caption='[[6t2a]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='6t2a' size='340' side='right'caption='[[6t2a]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[6t2a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[6t2a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mopeia_mammarenavirus Mopeia mammarenavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6T2A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6T2A FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
< | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t2a OCA], [https://pdbe.org/6t2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t2a RCSB], [https://www.ebi.ac.uk/pdbsum/6t2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t2a ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6t2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6t2a OCA], [https://pdbe.org/6t2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6t2a RCSB], [https://www.ebi.ac.uk/pdbsum/6t2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6t2a ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/NCAP_MOPEI NCAP_MOPEI] Encapsidates the genome, protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC). Serves as template for viral transcription and replication. The increased presence of protein N in host cell does not seem to trigger the switch from transcription to replication as observed in other negative strain RNA viruses. Through the interaction with host IKBKE, strongly inhibits the phosphorylation and nuclear translocation of host IRF3, a protein involved in interferon activation pathway, leading to the inhibition of interferon-beta and IRF3-dependent promoters activation. Encodes also a functional 3'-5' exoribonuclease that degrades preferentially dsRNA substrates and thereby participates in the suppression of interferon induction.[HAMAP-Rule:MF_04085] | |||
==See Also== | ==See Also== | ||
| Line 17: | Line 16: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: | [[Category: Mopeia mammarenavirus]] | ||
[[Category: Ferron | [[Category: Ferron F]] | ||
[[Category: Nguyen | [[Category: Nguyen THV]] | ||
Latest revision as of 15:52, 24 January 2024
Mopeia Virus Exonuclease domain partially complexed with ManganeseMopeia Virus Exonuclease domain partially complexed with Manganese
Structural highlights
FunctionNCAP_MOPEI Encapsidates the genome, protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC). Serves as template for viral transcription and replication. The increased presence of protein N in host cell does not seem to trigger the switch from transcription to replication as observed in other negative strain RNA viruses. Through the interaction with host IKBKE, strongly inhibits the phosphorylation and nuclear translocation of host IRF3, a protein involved in interferon activation pathway, leading to the inhibition of interferon-beta and IRF3-dependent promoters activation. Encodes also a functional 3'-5' exoribonuclease that degrades preferentially dsRNA substrates and thereby participates in the suppression of interferon induction.[HAMAP-Rule:MF_04085] See Also |
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