3osm: Difference between revisions

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<StructureSection load='3osm' size='340' side='right'caption='[[3osm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3osm' size='340' side='right'caption='[[3osm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3osm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OSM FirstGlance]. <br>
<table><tr><td colspan='2'>[[3osm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OSM FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ose|3ose]], [[3ost|3ost]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KCC4, YCL024W, YCL24W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3osm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3osm OCA], [https://pdbe.org/3osm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3osm RCSB], [https://www.ebi.ac.uk/pdbsum/3osm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3osm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3osm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3osm OCA], [https://pdbe.org/3osm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3osm RCSB], [https://www.ebi.ac.uk/pdbsum/3osm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3osm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/KCC4_YEAST KCC4_YEAST]] Involved in regulation of bud growth during cell cycle and in septin organization. Plays a role in cell wall synthesis.<ref>PMID:12773812</ref> 
[https://www.uniprot.org/uniprot/KCC4_YEAST KCC4_YEAST] Involved in regulation of bud growth during cell cycle and in septin organization. Plays a role in cell wall synthesis.<ref>PMID:12773812</ref>  
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Phospholipid-binding modules such as PH, C1, and C2 domains play crucial roles in location-dependent regulation of many protein kinases. Here, we identify the KA1 domain (kinase associated-1 domain), found at the C terminus of yeast septin-associated kinases (Kcc4p, Gin4p, and Hsl1p) and human MARK/PAR1 kinases, as a membrane association domain that binds acidic phospholipids. Membrane localization of isolated KA1 domains depends on phosphatidylserine. Using X-ray crystallography, we identified a structurally conserved binding site for anionic phospholipids in KA1 domains from Kcc4p and MARK1. Mutating this site impairs membrane association of both KA1 domains and intact proteins and reveals the importance of phosphatidylserine for bud neck localization of yeast Kcc4p. Our data suggest that KA1 domains contribute to "coincidence detection," allowing kinases to bind other regulators (such as septins) only at the membrane surface. These findings have important implications for understanding MARK/PAR1 kinases, which are implicated in Alzheimer's disease, cancer, and autism.
 
Kinase associated-1 domains drive MARK/PAR1 kinases to membrane targets by binding acidic phospholipids.,Moravcevic K, Mendrola JM, Schmitz KR, Wang YH, Slochower D, Janmey PA, Lemmon MA Cell. 2010 Dec 10;143(6):966-77. PMID:21145462<ref>PMID:21145462</ref>
 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 3osm" style="background-color:#fffaf0;"></div>


==See Also==
==See Also==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 18824]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Non-specific serine/threonine protein kinase]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Lemmon, M A]]
[[Category: Lemmon MA]]
[[Category: Moravcevic, K]]
[[Category: Moravcevic K]]
[[Category: Kinase]]
[[Category: Lipid binding protein]]
[[Category: Membrane association]]
[[Category: Transferase]]

Latest revision as of 13:36, 21 February 2024

Structure of the Kinase Associated Domain-1 (KA1) from Kcc4pStructure of the Kinase Associated Domain-1 (KA1) from Kcc4p

Structural highlights

3osm is a 1 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

KCC4_YEAST Involved in regulation of bud growth during cell cycle and in septin organization. Plays a role in cell wall synthesis.[1]

See Also

References

  1. ↑ Okuzaki D, Watanabe T, Tanaka S, Nojima H. The Saccharomyces cerevisiae bud-neck proteins Kcc4 and Gin4 have distinct but partially-overlapping cellular functions. Genes Genet Syst. 2003 Apr;78(2):113-26. PMID:12773812

3osm, resolution 1.70Å

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