3ojs: Difference between revisions

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<StructureSection load='3ojs' size='340' side='right'caption='[[3ojs]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3ojs' size='340' side='right'caption='[[3ojs]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ojs]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_25104 Atcc 25104]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJS FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ojs]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OJS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OJS FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=XJS:2-DEOXY-5-[9-(3-{[4-(DIETHYLAMINO)-4-OXOBUTANOYL]AMINO}PROPYL)-18-ETHYL-5,8,14,17-TETRAOXO-4,9,13,18-TETRAAZAICOS-1-YN-1-YL]URIDINE+5-(TETRAHYDROGEN+TRIPHOSPHATE)'>XJS</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=XJS:2-DEOXY-5-[9-(3-{[4-(DIETHYLAMINO)-4-OXOBUTANOYL]AMINO}PROPYL)-18-ETHYL-5,8,14,17-TETRAOXO-4,9,13,18-TETRAAZAICOS-1-YN-1-YL]URIDINE+5-(TETRAHYDROGEN+TRIPHOSPHATE)'>XJS</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ktq|3ktq]], [[3lwl|3lwl]], [[3lwm|3lwm]], [[3m8r|3m8r]], [[3m8s|3m8s]], [[3oju|3oju]]</div></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">polA, pol1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=271 ATCC 25104])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ojs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ojs OCA], [https://pdbe.org/3ojs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ojs RCSB], [https://www.ebi.ac.uk/pdbsum/3ojs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ojs ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ojs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ojs OCA], [https://pdbe.org/3ojs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ojs RCSB], [https://www.ebi.ac.uk/pdbsum/3ojs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ojs ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPO1_THEAQ DPO1_THEAQ]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 3ojs" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3ojs" style="background-color:#fffaf0;"></div>
==See Also==
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 25104]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Diederichs, K]]
[[Category: Thermus aquaticus]]
[[Category: Marx, A]]
[[Category: Diederichs K]]
[[Category: Obeid, S]]
[[Category: Marx A]]
[[Category: Binding pocket]]
[[Category: Obeid S]]
[[Category: C5 modified nucleotide analog]]
[[Category: Denron-labeled triphosphate]]
[[Category: Dna polymerase]]
[[Category: Transferase-dna complex]]

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