2ogo: Difference between revisions
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<StructureSection load='2ogo' size='340' side='right'caption='[[2ogo]], [[Resolution|resolution]] 3.66Å' scene=''> | <StructureSection load='2ogo' size='340' side='right'caption='[[2ogo]], [[Resolution|resolution]] 3.66Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ogo]] is a | <table><tr><td colspan='2'>[[2ogo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OGO FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G34:(3AS,4R,5S,6S,8R,9R,9AR,10R)-5-HYDROXY-4,6,9,10-TETRAMETHYL-1-OXO-6-VINYLDECAHYDRO-3A,9-PROPANOCYCLOPENTA[8]ANNULEN-8-YL+{[(3-EXO)-8-METHYL-8-AZABICYCLO[3.2.1]OCT-3-YL]THIO}ACETATE'>G34</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.66Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G34:(3AS,4R,5S,6S,8R,9R,9AR,10R)-5-HYDROXY-4,6,9,10-TETRAMETHYL-1-OXO-6-VINYLDECAHYDRO-3A,9-PROPANOCYCLOPENTA[8]ANNULEN-8-YL+{[(3-EXO)-8-METHYL-8-AZABICYCLO[3.2.1]OCT-3-YL]THIO}ACETATE'>G34</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ogo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ogo OCA], [https://pdbe.org/2ogo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ogo RCSB], [https://www.ebi.ac.uk/pdbsum/2ogo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ogo ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ogo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ogo OCA], [https://pdbe.org/2ogo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ogo RCSB], [https://www.ebi.ac.uk/pdbsum/2ogo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ogo ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/RL3_DEIRA RL3_DEIRA] One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity).[HAMAP-Rule:MF_01325_B] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Deinococcus radiodurans]] | [[Category: Deinococcus radiodurans]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Auerbach-Nevo | [[Category: Auerbach-Nevo T]] | ||
[[Category: Bashan | [[Category: Bashan A]] | ||
[[Category: Davidovich | [[Category: Davidovich C]] | ||
[[Category: Yonath | [[Category: Yonath A]] | ||