3dcl: Difference between revisions

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<StructureSection load='3dcl' size='340' side='right'caption='[[3dcl]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
<StructureSection load='3dcl' size='340' side='right'caption='[[3dcl]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3dcl]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCL FirstGlance]. <br>
<table><tr><td colspan='2'>[[3dcl]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCL FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM_1086 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 ATCC 43589])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dcl OCA], [https://pdbe.org/3dcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dcl RCSB], [https://www.ebi.ac.uk/pdbsum/3dcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dcl ProSAT], [https://www.topsan.org/Proteins/MCSG/3dcl TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dcl OCA], [https://pdbe.org/3dcl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dcl RCSB], [https://www.ebi.ac.uk/pdbsum/3dcl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dcl ProSAT], [https://www.topsan.org/Proteins/MCSG/3dcl TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9X0H2_THEMA Q9X0H2_THEMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dcl_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dcl_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43589]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Chruszcz, M]]
[[Category: Thermotoga maritima]]
[[Category: Edwards, A]]
[[Category: Chruszcz M]]
[[Category: Evdokimova, E]]
[[Category: Edwards A]]
[[Category: Joachimiak, A]]
[[Category: Evdokimova E]]
[[Category: Kudritska, M]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Kudritska M]]
[[Category: Minor, W]]
[[Category: Minor W]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Sad]]
[[Category: Tm1086]]
[[Category: Unknown function]]

Latest revision as of 11:58, 30 October 2024

Crystal structure of TM1086Crystal structure of TM1086

Structural highlights

3dcl is a 5 chain structure with sequence from Thermotoga maritima. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.25Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9X0H2_THEMA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dcl, resolution 2.25Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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