Structure superposition tools: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

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 *Help on server: YES.
 *Structure neighbors (pre-calculated): NO.
-*Does alignment involve sequence comparison? NO.
+*Does superposition involve sequence comparison? NO.
-*Rigid alignment: YES.
+*Rigid superposition: YES.
-*Flexible alignment: NO.
+*Flexible superposition: NO.
-*Multiple alignment: NO.
+*Multiple superposition: NO.
 *Structure-based sequence alignment: YES
 *Search with uploaded models: YES
-*Visualization: 3Dmol.js
+*Visualization: YES.
 *Color by deviation: NO.
 *Special features:
 **Purely geometric structure search with no dependence on sequence.
-**For each result, provides a 3d structure alignment, a sequence alignment, and a downloadable PDB alignment file.
+**For each result, provides a 3d structure superposition, a sequence alignment, and a downloadable PDB superposition file.
-**Provide results even for uploaded PDB files with very low resemblance to existing structures. Therefore, is suitable for testing the output of protein structure prediction algorithms.
+**Provides results even for uploaded PDB files with very low resemblance to existing structures. Therefore, is suitable for testing the output of protein structure prediction algorithms.
 ===SuperPose===