7ez0: Difference between revisions
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==Apo L-21 ScaI Tetrahymena ribozyme== | ==Apo L-21 ScaI Tetrahymena ribozyme== | ||
<StructureSection load='7ez0' size='340' side='right'caption='[[7ez0]]' scene=''> | <StructureSection load='7ez0' size='340' side='right'caption='[[7ez0]], [[Resolution|resolution]] 3.14Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EZ0 FirstGlance]. <br> | <table><tr><td colspan='2'>[[7ez0]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EZ0 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ez0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ez0 OCA], [https://pdbe.org/7ez0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ez0 RCSB], [https://www.ebi.ac.uk/pdbsum/7ez0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ez0 ProSAT]</span></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ez0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ez0 OCA], [https://pdbe.org/7ez0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ez0 RCSB], [https://www.ebi.ac.uk/pdbsum/7ez0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ez0 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Single-particle cryogenic electron microscopy (cryo-EM) has become a standard technique for determining protein structures at atomic resolution(1-3). However, cryo-EM studies of protein-free RNA are in their early days. The Tetrahymena thermophila group I self-splicing intron was the first ribozyme to be discovered and has been a prominent model system for the study of RNA catalysis and structure-function relationships(4), but its full structure remains unknown. Here we report cryo-EM structures of the full-length Tetrahymena ribozyme in substrate-free and bound states at a resolution of 3.1 A. Newly resolved peripheral regions form two coaxially stacked helices; these are interconnected by two kissing loop pseudoknots that wrap around the catalytic core and include two previously unforeseen (to our knowledge) tertiary interactions. The global architecture is nearly identical in both states; only the internal guide sequence and guanosine binding site undergo a large conformational change and a localized shift, respectively, upon binding of RNA substrates. These results provide a long-sought structural view of a paradigmatic RNA enzyme and signal a new era for the cryo-EM-based study of structure-function relationships in ribozymes. | |||
Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 A resolution.,Su Z, Zhang K, Kappel K, Li S, Palo MZ, Pintilie GD, Rangan R, Luo B, Wei Y, Das R, Chiu W Nature. 2021 Aug 11. pii: 10.1038/s41586-021-03803-w. doi:, 10.1038/s41586-021-03803-w. PMID:34381213<ref>PMID:34381213</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
</div> | |||
<div class="pdbe-citations 7ez0" style="background-color:#fffaf0;"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Chiu W]] | [[Category: Chiu, W]] | ||
[[Category: Das R]] | [[Category: Das, R]] | ||
[[Category: Kappel K]] | [[Category: Kappel, K]] | ||
[[Category: Luo B]] | [[Category: Luo, B]] | ||
[[Category: Su Z]] | [[Category: Su, Z]] | ||
[[Category: Zhang K]] | [[Category: Zhang, K]] | ||
[[Category: Rna]] | |||
[[Category: Rna structure]] | |||
[[Category: Tetrahymena ribozyme]] | |||