Lipase lid morph: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

@@ Line 16: / Line 16: @@
 *<scene name='Lipase_lid_morph/Lightseagreen_hinge/5'>Spacefilling morph</scene> ({{Template:ColorKey_Polar}}, {{Template:ColorKey_Hydrophobic}}, <font color='orange'><b>catalytic triad: Ser209, Glu341, and His449</b></font><ref name='2states1994' />).
-A second morph<ref>This is a [[Jmol/Storymorph|rigid body morph]] based on the superoposition in PDB file is [[Image:1TRH_1LPM.pdb]].</ref> shows a <scene name='49/493694/Storymorph/1'>different path</scene> between the same initial and final experimental structures.
+An alternate morph<ref>This is a [[Jmol/Storymorph|rigid body morph]] based on the superoposition in PDB file is [[Image:1TRH_1LPM.pdb]].</ref> shows a <scene name='49/493694/Storymorph/1'>different path</scene> between the same initial and final experimental structures. The position of the inhibitor in the 1lpm structure is shown throughout; it would clash with the conformation of the lid in the 1trh structures, showing that closed lid and inhibitor binding are mutually exclusive.
+<jmol>
+  <jmolButton>
+    <script>script "https://proteopedia.org/wiki/images/a/a2/Storymorph.spt";
+domain2 = {(75-85)};
+model 2;
+structures = [{1.2}, {1.1}];
+domains = [
+  [{protein and not domain2}],
+  [{domain2}, {(74,86) and *.CA}],
+];
+morph_palindrome = 1;
+morph(15,structures,domains);</script>
+    <text>Run alternate morph</text>
+  </jmolButton>
+</jmol>
 ==See Also==